Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g00483 | ATGGATCCTTCTAGTGGACAACACCATCAGGAAATGTCATCAAACCAGGGACTGGAGAACATGATAGGATGCTCCACAAAGAGTCAGCAACAAGAGAGAAAGCCAAGGCCACAACCAGAACAAGCACTCAAATGTCCAAGATGTGACTCTACCAACACCAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAATCTTGCAGAAGATACTGGACCAAAGGTGGAACACTCAGGAATGTTCCTGTTGGTGGTGGATGCAGGAAGAACAAGAGATCTTCTAATTCTTCTTCTTCATCAACTACTTCCTCTTCATCTAATTCACCTGCACCCTCTTCAAGGAGGCCTCAAGATCATCATCATGGATTCATCTCACCTAATAATCCTCTCATCACTGCTTTCCCTCATTTGGCTTATGATCATCATCATCCTTCTTCTTCTCCCACCAGTGATCTCACCTTAGCCCTTGCAAGGCTCCAGAAACAATCAATGCCTTTTGATGATCATGATCTCTCAATCTTGGGCAACCCCACAAGCTCCCTTTGTGATATTCTTGGAAATCAAGCCCTTAACACCCACAACACTTCATCAACTGGCTTCTTGGAAGCACTTAGAACCGGATTCCAAGGAAACAATAGTAATAACAATACTCTTCATCATCAGAATCTGTACTATTCATATGGGAATGGGGACATGGGTGAGGTTGTGGACAATGGTGCTGTTAATGGTGGAGACATGTTGCTACCTAATAACTATGATTCAGAGATGAGCAATGCAGCAACTCAAGCAGTGAGTGTCAGCACCATGAAACAAGAACTATGCAGTGAAGCTACTAAGGTTCTTGGTGGTGGCGGTTTTCCATGGCATAATAGTAGTAATGGGGACACAAACATGGGTGAATTTGATTCAGCAAGAGCAACTTGGAATGCTGGTTTCACATCTTCAAATTGGCATGGCCTTCTCCATAGTCCTCTAATGTAA | 996 | 0.4357 | MDPSSGQHHQEMSSNQGLENMIGCSTKSQQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSNSSSSSTTSSSSNSPAPSSRRPQDHHHGFISPNNPLITAFPHLAYDHHHPSSSPTSDLTLALARLQKQSMPFDDHDLSILGNPTSSLCDILGNQALNTHNTSSTGFLEALRTGFQGNNSNNNTLHHQNLYYSYGNGDMGEVVDNGAVNGGDMLLPNNYDSEMSNAATQAVSVSTMKQELCSEATKVLGGGGFPWHNSSNGDTNMGEFDSARATWNAGFTSSNWHGLLHSPLM | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g00483 | 331 | ProSitePatterns | Zinc finger Dof-type signature. | 45 | 81 | IPR003851 | GO:0003677|GO:0006355 | |
Aip08g00483 | 331 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 8 | 330 | IPR045174 | GO:0003700|GO:0006355 | |
Aip08g00483 | 331 | Pfam | Dof domain, zinc finger | 41 | 97 | IPR003851 | GO:0003677|GO:0006355 | |
Aip08g00483 | 331 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Aip08g00483 | 331 | ProSiteProfiles | Zinc finger Dof-type profile. | 43 | 97 | IPR003851 | GO:0003677|GO:0006355 | |
Aip08g00483 | 331 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Aip08g00483 | 331 | MobiDBLite | consensus disorder prediction | 87 | 131 | - | - | |
Aip08g00483 | 331 | PANTHER | DOF ZINC FINGER PROTEIN DOF3.2-LIKE | 8 | 330 | - | - | |
Aip08g00483 | 331 | MobiDBLite | consensus disorder prediction | 94 | 118 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g00483 | Aip-Chr8 | 3813022 | 3814436 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g00483 | 1 | 331 | C2C2-Dof Transcription Factor Family | AT2G28510 | 36.182 | 2.11e-43 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Aip08g00483 | zf-Dof | 7.2e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g00483 | - | - | aip:107612899 | 641.728 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip08g00483 | 08 | 3813022 | 3814436 | Aip08g00483 | 08 | 3813022 | 3814436 | ECH | |
Aip08g00483 | 08 | 3813022 | 3814436 | Aip03g00396 | 03 | 3798987 | 3800464 | PCT |