Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00482 ATGGAGAAGTTCCTCGACAACTTGACGCCGATGGATCTGATGCGATCGGAGAAGATGACCTTCGTCCAGCTCATCATCCCCGCCGAGTCCGCTCACCGAGCCATCTCCTACCTCGGCGAACTCGGACTCCTCCAATTCCGCGACTTAAATGCTGATAAAAGCCCTTTCCAAAGAACGTTTGTTAATCAGGTAAAGCGTTGTGCGGAAATGTCACGGAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGCATAATGTCTTCTTCTCATACTGCACTGCAACCAGAGATTGACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAATTCCAACAGTGACAAACTTCGGCAATCATATAATGAACTCCTCGAATTCAAGATTGTATTGCAGAAGGCATGTGGTTTTCTTGTTTCAAGTCATGGCCGTGCTATTCCTGACGAGAGAGAACTACAAGAGAATGTATACTCAAATGACTTTGTTGAAACAACATCTTTGCTTGAACAGGAAATAAGACCTGGACCATCAAATCCGTCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGCTACTTCGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGACGACCAAATCATGGATCCTGTTTCAGCTGAAATGCAGGCAAGAACTAAGATTCTGAAAATTTGTGAGGCATTTGGGGCAAATTGTTATCCTGTTCCAGAAGATATAAGCAAACAGAGGCAAATAACTAGAGAGGTTTCGTCGCGCCTTACTGACTTGGAGGCAACTTTGGATGCGGGGTTGAGGCACCGCAATAAGGCTCTAGCTTCTGTAGGGGAACATCTATCAGACTGGATGAACATGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAGTGTCTTGTTGGAGAGGGATGGTGCCCTATATTTGCAAAAACACAGATTCAGGAGGCATTGCAACGGGCAACTTTTGATAGCAGTTCACAAGTAGGCATAATCTGCCATCCAATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAAGTCCATATCAGGAGATTGTTGATGCATATGGTGTTGCGAGATACCAAGAAGCAAATCCTGCTGTTTACACAACTATTGTATTCCCCTTCCTATTTGCTGTGATGTTTGGGGATTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGATTCTTATAGCGCGCGAAAGCAAGCTCAGTACCCAGAAGCTTGGAAGTTTTATGGAGATGCTATTTGGTGGACGCTATGTACTTCTTTTGATGTCACTATTCTCAATCTATTGTGGATTAATCTACAATGAATTCTTTTCTGTTCCGTTTCACATATTTGGTGAGTCAGCTTACAGATGCCGAGATAATACATGCAGGGATGCACATACTATTGGCTTGGTCAAAGTCCGAGATCCATATCCATTTGGTGTGGATCCCAAGTGGCGTGGAAGTCGTTCAGAGTTGGCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTGCTTGGTGTGGTGCATATGAACTTGGGAATTATATTAAGTTATTTTAATGCTCGGTTTTTTGGGAACTCACTGGATATAAGGTACCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTTTATTTGGGTATCTTTCCCTCCTCATTGTTGTTAAGTGGTGTACTGGTTCTCAGGCGGACCTTTATCATGTAATGATATACATGTTTTTGAGCCCCACAGATAATCTTGGTGATAATGAGCTGTTCTGGGGTCAAAGGCCACTTCAAATTGTATTATTGCTTTTGGCACTGATTGCGGCTCCGTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGATTCATACTGAGAGATTTCAAGGTCGTAGTTATGGTATTCTTAATACCTCTGAGATGGATCTTGAGGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTCAGTGAGGTTTTTGTTCACCAAATGATCCACGCCATTGAGTTTATTCTAGGTTCAGTTTCAAATACAGCTTCGTATCTTCGACTTTGGGCACTTAGCTTGGCTCACTCCGAACTTTCTACTGTTTTCTATGAGAAAGTTCTGCTTCTTGCTTGGGGGTATGACAATCTTATCATTCGGTTACTGGGGCTAGCCGTGTTTGCCTTTGCAACTGCCTTTATACTGCTTATGATGGAGACTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTCGAATTTCAAAACAAATTCTACCATGGTGATGGCTACAAATTCAAGCCTTTTTCCTTTGCAGCCTTAACAGATGATGATGAATGA 2418 0.4222 MEKFLDNLTPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGIMSSSHTALQPEIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHGRAIPDERELQENVYSNDFVETTSLLEQEIRPGPSNPSGLRFISGIICKSKLLRFERMLFRATRGNMLFNQAPADDQIMDPVSAEMQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGLRHRNKALASVGEHLSDWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDSSSQVGIICHPMDAVESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIVFPFLFAVMFGDWGHGICLLLGALILIARESKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGESAYRCRDNTCRDAHTIGLVKVRDPYPFGVDPKWRGSRSELAFLNSMKMKMSILLGVVHMNLGIILSYFNARFFGNSLDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGDNELFWGQRPLQIVLLLLALIAAPWMLFPKPFILKKIHTERFQGRSYGILNTSEMDLEEPDSARQHHHEEFNFSEVFVHQMIHAIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLLGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFAALTDDDE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00482 805 Pfam V-type ATPase 116kDa subunit family 37 797 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip08g00482 805 PIRSF ATP6V0A1 9 805 IPR026028 GO:0000220|GO:0046961
Aip08g00482 805 Coils Coil 100 127 - -
Aip08g00482 805 PANTHER VACUOLAR PROTON ATPASES 5 805 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip08g00482 805 PANTHER VACUOLAR PROTON ATPASE A1 5 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00482 Aip-Chr8 3791500 3799395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00482 1 798 Primary Pumps ATPases(2) AT2G28520 79.755 0.0 1343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00482 K02154 - gmx:100776037 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00482 08 3791500 3799395 Aip08g00482 08 3791500 3799395 ECH
Aip08g00482 08 3791500 3799395 Aip03g00400 03 3856432 3864042 PCT