Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00468 ATGGAGCAGTCAGCAGGGAAATCACCGAAGAAATCACCACTCAAACCGTTTCCCAGAGATCCACGTGGCTCCCTCGAAGTCTTTAACCCTGCCTCCTCCTACTCCACCGCATCCGCAGCGGGCAATCCTACCGGCTCGCCGGCGGCGGCGCGTCCTCAGCCTATATGGAAAACCTGGGCGGCAGAGCAGCAGCTGCCACGCAGTAACTCCTTGGAGGAGCTGACCACCACTGCCGCCACGTCCACAACAACCACTGCCACCTCCTGGATGGCACTTAAGGAACCCATTCCGCTGGCGAGTTCGGAGTCTGGTGCGGCGGCGCAGAGAGCTGCAGAGTGGGGATTAGTACTGAAAACGGACACGGAGACCGGGAAGCCTCAGGGAGTGGCGGTTCGAAACTCCGACGGCGGCGGTTCCTCCCGGAGGAACTCGAAAAACTCAGCTCGCACCTCCGGCGACTCCTCGGAGGAAGCGGAATCGCGCGGGATCCCGAGAGTATCGGAGGACCTGAAGAACGCCCTTTCGGCGTTTCAACAAACTTTCGTGGTTTCTGATGCTACCAAAGCCGATTACCCGATCCTTTACGCCAGTGCCGGGTTCTTCAAGATGACTGGTTACACCTCCAAGGAGGTGATAGGTAGAAACTGTCGGTTTTTACAGGGTGCGGAAACGGATCCGGATGACGTGGCAAGCATAAGGGAAGCATTGGAAGCTGGGAAGAGTTACTGTGGAAGGTTGCTGAATTACAAGAAGGATGGGACGCCCTTCTGGAACCTTCTTACTATTTCACCCATCAAGGACGAGGATGGCAAAGTCATCAAATTCATAGGAATGCAAGTGGAGGTTAGCAAGCACACGGAGGGGGCCAAGGAGAAGGCGTTACGTCCCAATGGCTTGCCTGAATCATTGATTCGATATGATGCACGGCAAAAAGAGAATGCTACAACTTCAGTAACGGAGTTGGTGAGTGCCATAAAGCGTCCTCGAGCACTCAGTGAATCAACAAACCGCCGTCCCTTCATCAGAAATTCATCCGGAGTCGCTGACCGTCATCAACAAGAAGAGGCAGAGCACAAAACAGAGAAAACATCAAGGAGAAAATCTGAGAGCGTAGCTTCATCTGCTAGACGCAAATCACAAGGAGAAGGAGGACATGGATTAACTTCATTGCAGCAAATCAGTGAGGTCCCTGAAAAGAAGCAGAAAAACTCCCGTCGCCGTTCTTTCATGGGGTTCATGAAGAAAAATCAGGCAAATGAAGAAAGCATAGATAACGAAGGTGTTGAGGAAGTGAGCTCAGAGAGTGAGGATGATGATGACAGGCCTGATAGTTTTGAATTTGAGGGCAAAGAGATCCAAAGGGAGAAGAGGAAAGGTCTTGATCTTGCCACCACACTTGAACGTATTGAGAAAAACTTTGTCATCACTGATCCTAGGCTCCCTGACAATCCCATTATATTTGCTTCTGACAGCTTCTTAGAGCTTACTGAATATAGTCGTGAAGAAATCTTGGGCAAAAATTGCAGATTTCTTCAAGGACCTGAAACAGATCCAGCAACTGTGAAAAAAATTAGACAAGCCATTGACAACCAAACTGAAGTTACTGTACAACTCATTAATTATACAAAGACAGGTAAAAAGTTCTGGAACTTGTTCCATCTGCAACCTATGCGTGACCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTCGACGGTAGCCAACATGTGGAGCCTCTTCACAACTGCATCGCAGAAAATACTGCAAAAGAAGGAGAACAACTGGTCAAACAAACTGCAGAAAATGTTGATGAGGCAGTAAGAGAACTTCCGGATGCTAATATGAAACCGGACGATTTATGGATGAATCATTCAAAAGTGGTTCAGCCAAAACCTCATAGGAAGGAAGATGCTGCTTGGAGAGCTATCAAGAAGATCCTGGACAGTGGAGAACAGATAGGCTTAAAGCACTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGCAGTGTGCATCTAGTGGAGCTATGTGGAACTGGTCACCATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTTGACATGTTGGACCATCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACCAAATCACATGTTTGTTTGATAACTGATTACTGCCCTGGTGGAGAACTGTTCCTGCTTCTTGATCGACAGCCAACAAAAGTTCTTAAGGAAGAGGCTGCCAGATTTTATGCTGCTGAGGTAGTGGTTGCATTGGAGTATCTTCATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTAATCCAGAGCAATGGACATGTGGCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGCTGCTTCTACCAGCCACGGATGACAAGAAGAAAAAGAAGAAAAAACAACAAAAAGGTCAACAGGTTCCGGTGTTTATGGCTGAACCCATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATATCTGGTTCAGGCCACACTAGTGCTGTGGATTGGTGGGCTCTTGGTGTTCTTCTATATGAAATGCTTTATGGGTATACACCATTCAGGGGAAAGACAAGGCAAAAAACATTTGCAAATATTCTACACAAGGATCTTAAATTTCCCAAAAGCAAACCAGTAAGTCTCCAGGGAAAGCAGCTAATTTATTGGTTGTTGCAAAGAGATCCCAAAGATAGATTGGGTTCACAAGAAGGAGCAAATGAAATTAAGCGTCATCCATTCTTTAAGTCTGTTAATTGGGCATTAGTCCGCTGCATGGGTTTTCTCAGATTCGCCTCTTTCTCCTTTTTCATCGCACTGTGCAACAACAATCGTTCATTCTCTCTTTCTCGCGCCTTCGCTGCTCTCCTACGCGTCGGGTTTCGATCCTCGCTTCTCTCTCGATTGAGGGTTTTAACTATTGATTGA 3033 0.4669 MEQSAGKSPKKSPLKPFPRDPRGSLEVFNPASSYSTASAAGNPTGSPAAARPQPIWKTWAAEQQLPRSNSLEELTTTAATSTTTTATSWMALKEPIPLASSESGAAAQRAAEWGLVLKTDTETGKPQGVAVRNSDGGGSSRRNSKNSARTSGDSSEEAESRGIPRVSEDLKNALSAFQQTFVVSDATKADYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAETDPDDVASIREALEAGKSYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVIKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKENATTSVTELVSAIKRPRALSESTNRRPFIRNSSGVADRHQQEEAEHKTEKTSRRKSESVASSARRKSQGEGGHGLTSLQQISEVPEKKQKNSRRRSFMGFMKKNQANEESIDNEGVEEVSSESEDDDDRPDSFEFEGKEIQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPATVKKIRQAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAENTAKEGEQLVKQTAENVDEAVRELPDANMKPDDLWMNHSKVVQPKPHRKEDAAWRAIKKILDSGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGHHFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKSHVCLITDYCPGGELFLLLDRQPTKVLKEEAARFYAAEVVVALEYLHCQGIIYRDLKPENVLIQSNGHVALTDFDLSCLTSCKPQLLLPATDDKKKKKKKQQKGQQVPVFMAEPMRASNSFVGTEEYIAPEIISGSGHTSAVDWWALGVLLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLQGKQLIYWLLQRDPKDRLGSQEGANEIKRHPFFKSVNWALVRCMGFLRFASFSFFIALCNNNRSFSLSRAFAALLRVGFRSSLLSRLRVLTID 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00468 1010 MobiDBLite consensus disorder prediction 348 373 - -
Aip08g00468 1010 ProSiteProfiles PAC domain profile. 532 586 IPR000700 -
Aip08g00468 1010 CDD PAS 193 282 IPR000014 -
Aip08g00468 1010 ProSiteProfiles PAS repeat profile. 458 531 IPR000014 -
Aip08g00468 1010 Pfam PAS domain 481 573 IPR000014 -
Aip08g00468 1010 Pfam PAS domain 189 283 IPR000014 -
Aip08g00468 1010 MobiDBLite consensus disorder prediction 62 83 - -
Aip08g00468 1010 MobiDBLite consensus disorder prediction 28 43 - -
Aip08g00468 1010 SMART pas_2 460 529 IPR000014 -
Aip08g00468 1010 SMART pas_2 168 237 IPR000014 -
Aip08g00468 1010 ProSiteProfiles PAS repeat profile. 166 237 IPR000014 -
Aip08g00468 1010 MobiDBLite consensus disorder prediction 133 151 - -
Aip08g00468 1010 ProSitePatterns Protein kinases ATP-binding region signature. 665 688 IPR017441 GO:0005524
Aip08g00468 1010 Gene3D PAS domain 180 339 - -
Aip08g00468 1010 MobiDBLite consensus disorder prediction 423 444 - -
Aip08g00468 1010 Pfam Protein kinase domain 662 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00468 1010 Gene3D Transferase(Phosphotransferase) domain 1 743 958 - -
Aip08g00468 1010 Gene3D PAS domain 447 611 - -
Aip08g00468 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Aip08g00468 1010 MobiDBLite consensus disorder prediction 329 445 - -
Aip08g00468 1010 PANTHER PHOTOTROPIN-1 116 962 - -
Aip08g00468 1010 PANTHER FLIPPASE KINASE 1-RELATED 116 962 - -
Aip08g00468 1010 MobiDBLite consensus disorder prediction 1 83 - -
Aip08g00468 1010 TIGRFAM sensory_box: PAS domain S-box protein 483 573 IPR000014 -
Aip08g00468 1010 TIGRFAM sensory_box: PAS domain S-box protein 192 287 IPR000014 -
Aip08g00468 1010 SUPERFAMILY Protein kinase-like (PK-like) 646 970 IPR011009 -
Aip08g00468 1010 MobiDBLite consensus disorder prediction 119 164 - -
Aip08g00468 1010 ProSiteProfiles PAC domain profile. 240 294 IPR000700 -
Aip08g00468 1010 CDD STKc_phototropin_like 657 961 - -
Aip08g00468 1010 SMART pac_2 243 285 IPR001610 -
Aip08g00468 1010 SMART pac_2 535 577 IPR001610 -
Aip08g00468 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 187 279 IPR035965 -
Aip08g00468 1010 CDD PAS 473 573 IPR000014 -
Aip08g00468 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 474 573 IPR035965 -
Aip08g00468 1010 Gene3D Phosphorylase Kinase; domain 1 658 742 - -
Aip08g00468 1010 Coils Coil 590 610 - -
Aip08g00468 1010 ProSiteProfiles Protein kinase domain profile. 659 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00468 1010 SMART serkin_6 659 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00468 Aip-Chr8 3628695 3639534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00468 1 960 AGC Kinase Gene Family AT3G45780 69.052 0.0 1322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip08g00468 Pkinase 6.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00468 K20715 - gmx:100817565 1469.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00468 08 3628695 3639534 Aip08g00468 08 3628695 3639534 ECH
Aip08g00468 08 3628695 3639534 Aip03g00413 03 4014599 4025211 PCT