Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00459 ATGTACACACGCGCCACCTCATCATCAACTTTTCTCTCGCCGGATTATCCCCCAGTGCACCCGTTCCCGGACGAACTGGCCCTCACGGAGTTGGAATCGCTTCTGAACTGCAACAACTCGGAGATAGTAAGCTTCAACAAGAGTAGTAGCAGCGGTAGTTACAATAGTGAGCATGGGTCGGTGATGCAGAGGAGCGTTAGCAGCAACTCTCTCCATAAGAATCCCTTCTCTGCTCTCTTGGCTGAGTTGTTCGACGACGACGCTCCTCTTAGGAGAGTTTGCAGCACCGGTGATCTCCACGGGACTACTCATGGCGGCATCATGCATAACAATAATGAATCAGCTGATAGTCCATTGTCAAGTGAAAGCAGCATGATCATTGAAGGAATGAGTAGAGCATGTAGGTATAGCCCTGAGGAGAAGAAACTCAGGATTGAGAGGTATAGAACCAAGAGAAACCAAAGAAACTTCAACAAGAAAATTAAGTATGTTTGCAGGAAGACTTTAGCAGACAGCAGGCCGCGCATTAGAGGACGATTCGCGAGGAACGACGAAATTGACAAGAATCCTTCATCAGTTCATCAATGGAGTCATCACATTGGTGCTGGAGCAGAGGAAGACCAAGAAGATCAAAACTGGGTCAGTATCTTTGATTCACTAGTTGCTGCAAATACTGATCATCAAGAGTCCCAGGACAGTTCTTCTTTCGGTTTATTGTATTAG 723 0.4661 MYTRATSSSTFLSPDYPPVHPFPDELALTELESLLNCNNSEIVSFNKSSSSGSYNSEHGSVMQRSVSSNSLHKNPFSALLAELFDDDAPLRRVCSTGDLHGTTHGGIMHNNNESADSPLSSESSMIIEGMSRACRYSPEEKKLRIERYRTKRNQRNFNKKIKYVCRKTLADSRPRIRGRFARNDEIDKNPSSVHQWSHHIGAGAEEDQEDQNWVSIFDSLVAANTDHQESQDSSSFGLLY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00459 240 ProSiteProfiles CCT domain profile. 141 183 IPR010402 GO:0005515
Aip08g00459 240 Pfam CCT motif 143 183 IPR010402 GO:0005515
Aip08g00459 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 240 IPR045281 GO:0009909
Aip08g00459 240 PANTHER CCT MOTIF PROTEIN 24 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00459 Aip-Chr8 3566957 3568202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00459 137 188 C2C2-CO-like Transcription Factor Family AT5G15850 46.154 2.52e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip08g00459 CCT 2.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00459 - - gmx:102661609 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00459 08 3566957 3568202 Aip08g00459 08 3566957 3568202 ECH
Aip08g00459 08 3566957 3568202 Aip03g00417 03 4092537 4094679 PCT