Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00456 ATGATGTATTACAGAAAACTTTCTTTGTTTTTCTGTGCTTTATCTATCTTTTATCCCTATCTGTGTTTCTCTGCCGATTTTGTTCCAGTAGATAACTACCTTATAGATTGTGGAGCAAGTTCTGGTACTGTTGTAGGTAACCGCAATTTCTCTGCGGATAGTGCTTCTAAGAAGCTATTATCCACTCAGCAAGATGTTCTTGCAAGTACTTCCTTGAAATCAATCACTTCCACTGGTGATTCCACTCTCTATCAAACTGCTAGGGTCTTCACTGGTTCCTCAAAGTACACTTTCCCAATCAAACAAAAAGGGAGACATTGGATCCGTCTTTATTTCTTTCCATTTACCTATCAGAAGTATGATATGAGTGCAGCGAAATTCTCGGTTGCCACGCAGAACAATGTCCTTGTTAGTGATTTTGGTGTGCAGAAAGATCCTGTGATGAAGGAATACTCTGTGAATGTGAGCTCTAATTCTCTTGTTATAGACTTTACCCCTTCGAGTGGTTCGATTGCCTTTGTGAATGCAATCGAAGTTGTTTCGGTCCCTGATGATCTCATTGATGATGCTGGTCTCAGCCTGACTAATGGATTATCAACCTACTCTGGCTTGGCAGCACAGGCTCTGGAGACGGTCTGGAGGGTTAACATGGGGGGTCCAACTGTCTCCTCTGGTAGTGACACTCTTCAACGAACCTGGGATCCGGATCTTAGCTTCCTAAAAGAAAAAAACCTTGCTGCTAATTTCTCAAATATTGGAGGTGTTCAGTATGTGAACGGCTCGGCTACTGAAAATGATGCTCCGGCTAGTGTTTATGGTACTGGACAACAGATGAACTCACAAAGTGATCCACGTGTTAATTTCAATGTGACATGGGAGTTTAAGGTGGATTCTGGATTTCAGTACCTTGTTAGACTTCACTTCTGTGATTTAGTGAGTAAAGGTCTCAATGAACTCTACTTCAATGTTTATGTTGATTCCTTGTTTGCTGCCAAGGATCTTGATCTTGCTTCAATAAATCAAAATGCCTTGGGTGTTCCATATTATAGGGATGTTGTTACACCCTTGACATCTAGCAACTTGCTTCGAGTAAGTATGGGACCTTCTAATGTAAATAAGGACTACCCTAATGCCATTCTGAATGGTTTGGAGATCATGAAAATGAACAATTCTGTGGGCAGTCTTAGTACAGCGACGGCTGCTGTTGCTACTACTTCTGGTTCAAATTCAAAGAATGTTGGTGTAATTGTGGGTGCAGTTCTTGGGGCAGTATGTGCAGTGGTCTTGGCTGGACTTTTGTGCGTACTATGCAGGAAAAGAAGGCGGTTGGCGCGGCGGAGGCAGTCTAAGACATGGATTCCTTTCTCCATCAACGGAACAACTTCTCACACCATGGGAAGTAAATATTCTAATGGTACTACAATTAGTGCTGCTTCAAACTTCGAGTACCGTGTCCCTCTTGCTGCAGTTCAGGAAGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGGATTGGTGGCTTTGGGAAAGTATACAAGGGGGAATTGAGCGACGGCACTAAAGTGGCAGTTAAGAGAGGAAATCCTCGGTCACAGCAGGGTATTGCCGAGTTCCGAACTGAAATCGAAATGCTGTCTCAGTTCCGTCACCGGCATCTGGTATCTTTGATTGGCTATTGTGATGAAAGGAATGAAATGATACTGATATATGAGTATATGGAGAAAGGAACACTCAAGGGTCATCTATATGGTTCGGGGTTCCCAACCTTAAGTTGGAAGGAGAGGCTTGAGATATGCATTGGAGCTGCTAGAGGGCTTCATTACCTGCACACCGGCTATGCTAAAGCAGTTATTCACCGCGATGTGAAGTCTGCAAATATCCTCCTTGATGAGAACCTGATGGCTAAAGTTGCTGATTTTGGATTATCCAAGACTGGGCCAGAACTTGATCAGACACATGTGAGCACAGCTGTTAAAGGAAGCTTTGGCTACCTTGATCCTGAATACTTCAGGAGGCAGCAGCTAACAGAAAAGTCTGATGTGTATTCATTCGGCGTGGTTCTGTTTGAAGTTCTTTGTGCAAGACCTGTCATAGATCCGTCCCTTCCCAGGGAGATGGTAAACTTGGCAGAATGGGCAATGAAGTGGCAGAAGAAGGGGCAACTGGAGGAGATCATAGATCCGGCACTTGCAAGCAACATAAGACCGGAATCTCTCAGGAAGTTTGGAGAAACCGCGGAGAAATGCTTGGCAGACTTCGGTGTAGACAGGCCTTCTATGGGAGATGTATTGTGGAATTTGGAGTATGCCCTGCAGCTTCAAGAGTCTGCTACTCAAGGGAATGATCCTCAAGAAAACAGTACTAATATGATCAGTCTCTCTCCACAGGTCAACAACTTCAACGACGATGCAAGCGCCTCTACCATTAAATTTGAAGGCACAAATGTGGATGATCTGTCTGGTGTTTCAATGAGTAGGGTGTTTTCTCAGTTGGTGAAGTCAGAAGGAAGATGA 2514 0.4375 MMYYRKLSLFFCALSIFYPYLCFSADFVPVDNYLIDCGASSGTVVGNRNFSADSASKKLLSTQQDVLASTSLKSITSTGDSTLYQTARVFTGSSKYTFPIKQKGRHWIRLYFFPFTYQKYDMSAAKFSVATQNNVLVSDFGVQKDPVMKEYSVNVSSNSLVIDFTPSSGSIAFVNAIEVVSVPDDLIDDAGLSLTNGLSTYSGLAAQALETVWRVNMGGPTVSSGSDTLQRTWDPDLSFLKEKNLAANFSNIGGVQYVNGSATENDAPASVYGTGQQMNSQSDPRVNFNVTWEFKVDSGFQYLVRLHFCDLVSKGLNELYFNVYVDSLFAAKDLDLASINQNALGVPYYRDVVTPLTSSNLLRVSMGPSNVNKDYPNAILNGLEIMKMNNSVGSLSTATAAVATTSGSNSKNVGVIVGAVLGAVCAVVLAGLLCVLCRKRRRLARRRQSKTWIPFSINGTTSHTMGSKYSNGTTISAASNFEYRVPLAAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKGHLYGSGFPTLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEEIIDPALASNIRPESLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQESATQGNDPQENSTNMISLSPQVNNFNDDASASTIKFEGTNVDDLSGVSMSRVFSQLVKSEGR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00456 837 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Aip08g00456 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Aip08g00456 837 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00456 837 Gene3D - 207 390 - -
Aip08g00456 837 Gene3D - 32 183 - -
Aip08g00456 837 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00456 837 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 829 - -
Aip08g00456 837 Gene3D Phosphorylase Kinase; domain 1 458 572 - -
Aip08g00456 837 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Aip08g00456 837 CDD STKc_IRAK 503 768 - -
Aip08g00456 837 Pfam Protein tyrosine and serine/threonine kinase 502 696 IPR001245 GO:0004672|GO:0006468
Aip08g00456 837 PANTHER OS07G0166700 PROTEIN 20 829 IPR045272 GO:0004714|GO:0006468
Aip08g00456 837 Gene3D Transferase(Phosphotransferase) domain 1 573 794 - -
Aip08g00456 837 Pfam Malectin-like domain 35 388 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00456 Aip-Chr8 3554215 3557520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00456 11 837 Receptor kinase-like Gene Family AT3G46290 65.191 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip08g00456 Malectin_like 9.8e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00456 - - gmx:100806488 1235.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00456 08 3554215 3557520 Aip08g00456 08 3554215 3557520 ECH
Aip08g00456 08 3554215 3557520 Aip03g00418 03 4103813 4107245 ECH
Aip08g00456 08 3554215 3557520 Aip03g00418 03 4103813 4107245 PCT