Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00442 ATGCCGATCTCTAAAATTGTGATTGGAAATGCTTCTGAGTTGAGGCAAAGCGATGCGCTTAAGGCCGCACTTGCTGAGTTCATCTCAATGCTTATCTTTGTTTTCGCCGGACAAGGCTCCGGCATGGCTTATAATAAGTTGACAAACAATGGCGCAGCAACACCAGCTGGCGTAGTGGCAGCATCATTGTCTCACGCCTTTGCTCTCTTTGTTGCAGTCTCCGTTGCCGCCAACATCTCCGGCGGCCACGTCAACCCTGCCGTCACTTTCGGCGCTTTCATTGGTGGCCACATCACTCTCCTCAGAACCATTCTCTATTGGATTGCTCAGTTGCTTGGCTCCGTTGTTGCTTGCTTGCTCCTTAAATTCGCCACAGCCGGACTCGAAACATCTGCATTTGCACTATCTTCTGGGGTTGGAGCATCGAATGCATTGGTGTTTGAGATTGTGATGACCTTTGGTCTCGTGTACACGGTGTATGCAACTGCCGTGGACCCAAAGAAGGGTGACGTTGGGATCATTGCTCCAATTGCCATTGGCTTCATTGTGGGTGCTAACATATTAGCCGGTGGGGCATTTGATGGTGCATCCATGAACCCAGCTGTGTCTTTTGGGCCTGCTGTTGTAAGCTGGACTTGGGCCAACCACTGGGTCTACTGGGCCGGCCCATTCATTGGTTCTGCTATTGCAGCTATTGTCTACGACGTTTTTTTCTTTTTTTTGAAGTTGATTCCTATGAGCTATGTTCCATTCTAA 756 0.4934 MPISKIVIGNASELRQSDALKAALAEFISMLIFVFAGQGSGMAYNKLTNNGAATPAGVVAASLSHAFALFVAVSVAANISGGHVNPAVTFGAFIGGHITLLRTILYWIAQLLGSVVACLLLKFATAGLETSAFALSSGVGASNALVFEIVMTFGLVYTVYATAVDPKKGDVGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWAGPFIGSAIAAIVYDVFFFFLKLIPMSYVPF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00442 251 SUPERFAMILY Aquaporin-like 13 241 IPR023271 -
Aip08g00442 251 Pfam Major intrinsic protein 13 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PANTHER AQUAPORIN-8 1 239 IPR034294 -
Aip08g00442 251 Gene3D Glycerol uptake facilitator protein. 4 241 IPR023271 -
Aip08g00442 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Aip08g00442 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00442 251 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00442 Aip-Chr8 3380993 3382341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00442 1 238 Major Intrinsic Protein MIP AT4G01470 80.672 1.79e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00442 K09873 - gmx:547794 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00442 08 3380993 3382341 Aip08g00442 08 3380993 3382341 ECH
Aip08g00442 08 3380993 3382341 Aip03g00437 03 4308964 4311914 ECH
Aip08g00442 08 3380993 3382341 Aip03g00437 03 4308964 4311914 PCT