Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00427 ATGGAGGAGTGTGTTGCGGCAGGGTCGTCATCATCGTCGTCAAGTTGTTCGCGATGGAACCCAACGAAAGAGCAGATAAGCACGTTGGAGGAGATCTATAACCAGGGAGTGAGAACTCCAAACCCTAAAGAAATTAAGGAGATTATGGAGAGGCTCAAGGTTTATGGTCCCATTGAAGGTAAGAACGTCTTCTACTGGTTCCAGAATCACAAAGCCAGGCAGAGACAGAGGCAAAAAGATCATCATCAACAACAACTACGTCTTCAACAACACCATCATCATCATCCTTATTTCAATCGCTTTCTCAATTCTATCTCTCCCCCGATTTCTCCTACTGTGGTGCGTAGCCCGGCATATGGGTTGGTACAGAATGAAATTGGGCACTTTCCAAATCAACACTCAAATATGGTGGTAAGCCCAAGGACTGATCAAGCATTGCCTGTGATGATGATGCCACCTCAGCCCATTAGCCCAAGGATTGAGGATGTTGTGCCAATGATGATCCCACCTGGGCCCATCAGCCCAAGAACATTGGATCTGTTTCCGCAGCACCCAACTGGCACTTTGGCAGCAGGCAGGGCAAGACAGCAATCTAATCATGAACTTGCAAATCACAACTTCATTGACTTTTTTACTTCTCCGGGCCGGGACCAACCTTGA 660 0.4727 MEECVAAGSSSSSSSCSRWNPTKEQISTLEEIYNQGVRTPNPKEIKEIMERLKVYGPIEGKNVFYWFQNHKARQRQRQKDHHQQQLRLQQHHHHHPYFNRFLNSISPPISPTVVRSPAYGLVQNEIGHFPNQHSNMVVSPRTDQALPVMMMPPQPISPRIEDVVPMMIPPGPISPRTLDLFPQHPTGTLAAGRARQQSNHELANHNFIDFFTSPGRDQP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00427 219 CDD homeodomain 18 78 IPR001356 GO:0003677
Aip08g00427 219 MobiDBLite consensus disorder prediction 71 91 - -
Aip08g00427 219 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g00427 219 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 195 IPR044555 GO:0003700|GO:0099402
Aip08g00427 219 SUPERFAMILY Homeodomain-like 12 82 IPR009057 -
Aip08g00427 219 SMART HOX_1 14 81 IPR001356 GO:0003677
Aip08g00427 219 Gene3D - 16 85 - -
Aip08g00427 219 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 5 195 - -
Aip08g00427 219 Pfam Homeodomain 16 76 IPR001356 GO:0003677
Aip08g00427 219 ProSiteProfiles 'Homeobox' domain profile. 12 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00427 Aip-Chr8 3268387 3269171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00427 1 178 Wox Gene Family AT5G59340 40.741 4.38e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip08g00427 Homeodomain 8.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00427 - - aip:107612346 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00427 08 3268387 3269171 Aip08g00427 08 3268387 3269171 ECH