Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00421 ATGTGCAAGTTCATTGACATATATAGTTTTGCAGATGCGTTTGGTGAGAATAGAAGGCTGCATCAGGTGATGAAGGATAAGAAGGTTCTCAAGAAGACCTTGAAGGAGGAAGAGGGGTATGAACGTCCCAATGATGGAGCTGTGGTTCAAGTGAAACATATTGGTAAGCTGCAAGATGGGACTGTTTTCGTGAAGAAGGGTCATGATGATGAGCAGCCATTTGAGTTTAAAATTGACGAGGAGCAAGTAATTGATGGACTTGATAAAACTGTGATGAACATGAAGAAAGGGGAAGTTGCATTGGTGACCATACATCCTGAGTATGCTTTTGGCTCATCTGGGTCAACTCAGGAATTGGCCACCGTTCCTGCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGGATCTGAATACACTAGAGAAGATAGAGGCAACTGGAAAGAAGAAGGAAGAAGGGAATGTATTGTTCAAGGCTGACAAATATGAAAGAGCATCAAAGAGATATGAAAAGGTATTGTACTCCCTGCAAAAATCTTAG 552 0.4167 MCKFIDIYSFADAFGENRRLHQVMKDKKVLKKTLKEEEGYERPNDGAVVQVKHIGKLQDGTVFVKKGHDDEQPFEFKIDEEQVIDGLDKTVMNMKKGEVALVTIHPEYAFGSSGSTQELATVPANSNVYYEVELVSFVKDLNTLEKIEATGKKKEEGNVLFKADKYERASKRYEKVLYSLQKS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00421 183 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 40 135 IPR001179 GO:0003755
Aip08g00421 183 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 46 138 IPR001179 GO:0003755
Aip08g00421 183 Gene3D Tetratricopeptide repeat domain 139 183 IPR011990 GO:0005515
Aip08g00421 183 Gene3D - 19 138 IPR046357 GO:0003755
Aip08g00421 183 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 26 145 - -
Aip08g00421 183 SUPERFAMILY FKBP-like 23 139 - -
Aip08g00421 183 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 26 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00421 Aip-Chr8 3221193 3222013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00421 22 175 Calmodulin-binding Proteins AT5G48570 74.534 2.77e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00421 K09571 K01802 gmx:100810243 240.736