Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00420 ATGGTAAAGCAATTGGTTTCAACAGAGAATTCCAGCCTTGAATTTAATCAGGATAAGAATAATCAAGGTTGCATGTGGGGTTTCTTTCATATTCTGGATTATCATCATTGGCATGTGAGAAAGGTGTTTGCTAACAAAAGGAAAAGACATGCCAGATGTAAGCACTTTTGCAACTCATCAATGCCTATATTTTTTGGTGGCGAAAAAGGCAAAAGATACCACAAACATGAGAGAAAAGAACAAGACACAGAAAACAGGCTTAAAGAAGGAAACTACAAAGGTGAATATGCACTTCATGTGGAGAAAGATGGCAAGAAAACAAAAGCTTCCCTTAACCATGAGAGTATACAAAAAAGGGCAAACAAATCTGATACAGACACTGCCAATGTGTTTAAGAATCATAGAGATGTTTTGGGGGTAGTTAAAGTGGAGAAGGATTTACTGCTTAAATTTCTAAGAGAATTAGATGCTGAAGGGAAAAACCTTCATCAAGCTTCTGACACCAAAGCAAGATTGACAAAATCAGGGTCATTTCCTTTAAGCTCATCTTCACAAATGAGAAGCATTACTCCTACTAGTACCTTGCAACACAAGAAAACCGAAGTGTGGGCCACTCCCAAAGAAGAAAGGTTGCTTGATAGTACTCAAACAACAAAACCAGTGCCTTTAGTGAGTGATCATGGCGTGCTTAGTGCCGGAGAACAAAAAACAGGCAATTCTCTGCTGCCATCTCATGGATTGAATCATAAAGGTTGGAACCAAGTTGTCATTCATCGTTTCAGAGTTATAAAGCATAAGATAAAACATACTCTTTTGGAGTTCAGAAAAAATGGTCACCACAGAGATTCATCTCAATATAGCAGCATCACTAATGATGAGAAAGAGGTGCAAAGCTTAGATGAAGGTGTGGTTCGAGAGTACATAAGGAGCAAAAGCTTAAAGGAGACTAAATCTTCTGATTATGCTTCCAACAGACAGGAAGCACAACGAGTTGTAAGAAGAACATCGTCTCTGAACGAATCGATGGATAAATATACTCAGTTGTTTGAGAAAAGCTTCAACTCAGATGTCAAGTGGCACAGTTCAAAGTCCAAAAGCTTAAGATTGACAAATGAGGATAAGAATACAAGTGACCATGCTTCTAGATTTTCCAGAAGCAATTTTTCACTGCCTAATATTGAGGCTTTAGGCTTCATTGTACACGAGGCACTTCTTGATATGAATGATAAAACAGATACTGAGGAGCCTGATAATAATGCTGACAGAAAACTGGTGGGACTTCCTTCAAAGAAAGATAAATCAATTGATCATGTTGAAGAGACTGAAATCACAGAAACAGCTAAAGCTGGCAGTGGAGATATGAATCCAAGTCCCTTATCTAATGATCAGGTTGAAGACAAAATTGATGCAGCAGTTACCAGTGAGAAAGTGGAAGATAAATATGAACATGAGTCAGCTAGGGGAGATGGAATTTTTCCTCAAGAAAAAGAAGAAATAGGTATGGCTATCCATGAAACTAAAAGTGAAGCAGATGCAACCCACCATACAGAAGGTAAAGAATTGGATATTCAAGGATCTAGCATGGATGGATTGAAGACTGATGAGTTACCAATTAAAGAAAGCAATGATTCCAATTTCAGATACGTGAAGGCCATTCTCCAATTTTCAGGTTTAATGGAAAATGAACATAGTCTAACGAGGCATACTATAGACCAGCGACTAAAGCCTTCTTTGATCATGGAAATGGAATCCTCTGTAGAGGAGAATACCAAAGCCTATGATCAACAGCTTCTTTTCAACCTAGTTGATGAGGTACTTATTGATATATATGAGAGGTCATCGAATCACTTCCCAAGGCCCTTCGCCTTCAACTACCTCCTCCATCCTGTGCCGAAAGGAGACTATCTTCTTAATGAAGTATGGTCCAGTGTTAAATCATACCTGAGCTTGAGGCCAGAGCTAGATCAGACATTAGACGATGTTGTGAGACGTGACTTGGCAAGAAGAAGTAGCTGGATGAACCTCCAGCAAGAAGAGGAGCAAGTTGCAATTGAACTAGAGGACATGATTATGGATGATTTATTAGATGAACTCGTCTTCTCATGA 2106 0.3884 MVKQLVSTENSSLEFNQDKNNQGCMWGFFHILDYHHWHVRKVFANKRKRHARCKHFCNSSMPIFFGGEKGKRYHKHERKEQDTENRLKEGNYKGEYALHVEKDGKKTKASLNHESIQKRANKSDTDTANVFKNHRDVLGVVKVEKDLLLKFLRELDAEGKNLHQASDTKARLTKSGSFPLSSSSQMRSITPTSTLQHKKTEVWATPKEERLLDSTQTTKPVPLVSDHGVLSAGEQKTGNSLLPSHGLNHKGWNQVVIHRFRVIKHKIKHTLLEFRKNGHHRDSSQYSSITNDEKEVQSLDEGVVREYIRSKSLKETKSSDYASNRQEAQRVVRRTSSLNESMDKYTQLFEKSFNSDVKWHSSKSKSLRLTNEDKNTSDHASRFSRSNFSLPNIEALGFIVHEALLDMNDKTDTEEPDNNADRKLVGLPSKKDKSIDHVEETEITETAKAGSGDMNPSPLSNDQVEDKIDAAVTSEKVEDKYEHESARGDGIFPQEKEEIGMAIHETKSEADATHHTEGKELDIQGSSMDGLKTDELPIKESNDSNFRYVKAILQFSGLMENEHSLTRHTIDQRLKPSLIMEMESSVEENTKAYDQQLLFNLVDEVLIDIYERSSNHFPRPFAFNYLLHPVPKGDYLLNEVWSSVKSYLSLRPELDQTLDDVVRRDLARRSSWMNLQQEEEQVAIELEDMIMDDLLDELVFS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00420 701 MobiDBLite consensus disorder prediction 364 384 - -
Aip08g00420 701 MobiDBLite consensus disorder prediction 278 297 - -
Aip08g00420 701 MobiDBLite consensus disorder prediction 168 200 - -
Aip08g00420 701 PANTHER PROTEIN TRM32 1 701 IPR044257 -
Aip08g00420 701 MobiDBLite consensus disorder prediction 315 334 - -
Aip08g00420 701 MobiDBLite consensus disorder prediction 166 201 - -
Aip08g00420 701 MobiDBLite consensus disorder prediction 364 380 - -
Aip08g00420 701 PANTHER PROTEIN TRM32 1 701 - -
Aip08g00420 701 Pfam Domain of unknown function (DUF4378) 546 697 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00420 Aip-Chr8 3209568 3212428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00420 136 691 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.153 5.33e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00420 - - ahf:112772681 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00420 08 3209568 3212428 Aip08g00420 08 3209568 3212428 ECH