Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00416 ATGGGAGTTTGTCTGAGTGCCCAAGTTAAAGCTGAGAGCCCCTACAACACTGGGGTGAACTCAAAGAATGTGAGCACAGATGGGAATGATCTCAGTAATATAAACAGTAAAGTTTCGTCTACCTCGATGCCACCGACTCCACGGAGTGAGGGAGAGATCTTGCAGTGTTCTAATTTAAAGAGCTTTAGTTTATCAGAACTTAAGACAGCCACGAGAAATTTCCGGCCGGACAGTGTGTTAGGAGAAGGTGGTTTTGGTTCTGTTTTTAAGGGTTGGATTGATGAGAATTATTTGGTGGCTTCCAAACCTGGCACTGGCATTGTTATTGCTGTGAAGAGACTTAATCAAGATGGCTTACAGGGTCACAGGGAGTGGTTGGCTGAAGTAAACTATCTTGGACAATTTTCTCATCCTCATCTAGTGAGATTGATTGGATATTGCCTTGAAGATGAACACCGCCTTCTCGTCTACGAGTTTATGCCTCGTGGCAGCTTGGAGAATCATTTGTTCAGGAGAGGCTCATACTTTCAACCTCTATCATGGAGTCTCCGTTTAAAGGTTGCTCTTGATGCAGCCAAAGGGCTTGCATTCCTTCACAGTGCCGAAACACAAGTGATTTACCGTGACTTTAAGACTTCCAATGTCTTGCTTGACTCGAATTACAATGCAAAACTTTCGGATTTCGGGCTAGCGAAAGATGGACCAACAGGTGACAAAAGTCATGTGTCAACAAGGGTGATTGGAACCTACGGATATGCAGCTCCTGAATATCTAGCTACTGGTCATCTTACTGCAAAGAGTGATGTCTATAGTTTTGGAGTAGTCCTACTTGAAATGTTATCCGGTAAGAGGTCGGTTGACAAGAATCGACCAACCGGACAACACAGTCTGGTGGAGTGGGCTAAACCATACCTGGCTAATAAACGCAAGGTCTTTCGAGTTTTGGACACGCGCCTCGAAGGACAGTATTCGGTTGAAGATGCCTATAAGGTAGCCACACTCACCTTGAGATGCATATCTAGAGAATCCAAGTTCAGGCCAAACATGGATGAAGTTGTTACATTACTGGAGCAGCTGCAGGCTCCTAATGCAGATGCAGGCAACCGAAATCCTTCTTGTAACGCGTCTCGCCCTCGTAGAAGAAGCGCTGATGATGTTAGCCATAGGAGGGCCACCCCTACAGCTTACCCTAGGCCCTCTGCTTCAACTCTATATACTTGA 1221 0.4554 MGVCLSAQVKAESPYNTGVNSKNVSTDGNDLSNINSKVSSTSMPPTPRSEGEILQCSNLKSFSLSELKTATRNFRPDSVLGEGGFGSVFKGWIDENYLVASKPGTGIVIAVKRLNQDGLQGHREWLAEVNYLGQFSHPHLVRLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSAETQVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVIGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKRSVDKNRPTGQHSLVEWAKPYLANKRKVFRVLDTRLEGQYSVEDAYKVATLTLRCISRESKFRPNMDEVVTLLEQLQAPNADAGNRNPSCNASRPRRRSADDVSHRRATPTAYPRPSASTLYT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00416 406 MobiDBLite consensus disorder prediction 362 406 - -
Aip08g00416 406 CDD STKc_IRAK 80 359 - -
Aip08g00416 406 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00416 406 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Aip08g00416 406 Gene3D Phosphorylase Kinase; domain 1 50 159 - -
Aip08g00416 406 Pfam Protein tyrosine and serine/threonine kinase 78 355 IPR001245 GO:0004672|GO:0006468
Aip08g00416 406 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Aip08g00416 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Aip08g00416 406 SUPERFAMILY Protein kinase-like (PK-like) 52 358 IPR011009 -
Aip08g00416 406 MobiDBLite consensus disorder prediction 15 49 - -
Aip08g00416 406 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 26 373 - -
Aip08g00416 406 MobiDBLite consensus disorder prediction 362 377 - -
Aip08g00416 406 PANTHER OS01G0588500 PROTEIN-RELATED 26 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00416 Aip-Chr8 3186932 3189116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00416 60 356 Glycoside Hydrolase AT3G07070 50.000 4.43e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip08g00416 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00416 - - adu:107461650 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00416 08 3186932 3189116 Aip08g00416 08 3186932 3189116 ECH
Aip08g00416 08 3186932 3189116 Aip03g00479 03 4660969 4663671 PCT