Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00406 ATGCTTTCTACCAATCCTTATCTAGAAAATTTCCCTGGTCATCTGCAACCAATAATGAATGGTTTTCATTCATCATCTTCATCTTCTTCCGGAACCATCTCAAGTGGAGATTCCACTGAGTCTAGTAAATATTCCAATAACATCCTCAGATACATAAGTGACATCCTCATGGACGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAACAGTGTTTGAGGCTCCAAGCTGCTGAAAAATCATTCTCTGAGGTGCTTGGAAATTCATCAAATTCTCCACCATCTCAAGGCTGCGATGAAAGCAACCAAGATGGTGATTACTGTCGCAGCACAAGCTTCGAAAGCTATAGCAGCTTTAACACTGATAATAGCTCTTATGAGTTTGATTGGGTCAATCTTGTTGGCGAGTATGAATCTTCTTTGCTACAAGCCTCTCTTCTTGGTGGATCTTATGGAACTCACTACCAGAACATGGTTCCATTGATCAACAATGAAGAAGGATCTAGTCCTGGAACAAGGGAAAAGAGAAGCTATCAGGTTGATGATGACGCTTCATATGAACAAGGCCGAAGAGGAAACAAGATCTCAGCTACTGTTTTCTCCGACGAGTCAGAACCACCGGAGATTCTTTATGAAGTGCTGCGTATCCCGTATGGAAGAAGTAAAAAATATTGTTGTGTTGAGCCGTTATCAAAAAATGACATGCTGAAGATGCAGAATGTTGGATCCAATTCCAAGACAGGACGTTCAAAGAACAGAAACAGCAACACAGATGCAACTGTGGATTTATGGACTCTGCTAACTCAATGTGCACAAGCAGTGGCAGACTATGATAAGAGGAATGCATACGATACACTCAAGCAGATTAGGCAGCATTCTTCACCGTCCGGCGATGGACTCCAGCGTATGGCGCATTACTTCGCCATTGGCCTCGAGACACGGTTGAATGCCGGAACACCGTCATATCCTCCCCTTGATATGGCTTCTGCTGCAGATATGTTGAAAGCTTACAAACTCTACGTTACAGCTTCGCCTTTGCAGTGGATGACAAATAAATTGGCAACCCAAACAATCAAGAACCTGGTTCAGAATGAAAGCCGCGTTCACATTATTGACTTTGGAATTAGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGTATATGTCAGAGAGAAACGGGGCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGTTTCCGGCCGACGGAAAGGGTCGAGGAGACCGGAAGACGGTTGGAGACTTTGTGTAAGAGGTACAAGGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATTAGGGTTGAGGATCTTAAGATAGATAGGGATGAAGTGACCGTTGTTAACTGCTTCTACAGGCTGAAAAACCTGCCTGATGAAACTGTGTCAGTGAACAGTCCAAGAGATGCAGTGCTGAAGCTGATGAGGAGGATTAATCCAAAGATCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGTGCACCGTTTTTCCCGACTCGGTTCAGGGAGGCTCTGTTCCACTTCTCATCACAGTTTAATATGTTTGAAGCTAATTGCCCCCGCGAAGATGCAGAAAGGATGATGCTTGAGAAAGGGATGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGAGCTACAAGCGATGGCAGATTAGGAACAAGAGAGCAGGATTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAATGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAACTGGGTTTTGCATGGCTGGAAAGGTCGTATTTTTCATGCTCTCTCTGTTTGGCTGGGCGCGACGCCGGCCATCGGGAACGCCCTCAAGGAGCCGTCATCCACAAAACGTGCAGCAGCCGACTTCTTCTCGCGTGGGCGCTTTCATCTCCTACCATCGGAAGAAACTCCCACCTGCTCGTCAACGAGCCACACGCTGGGAGAAGGGCGTTCACCAATGAGGACCTCAACGTCTCCGGGAGCGACTTCCGGTGAACACGAGCCAGTGAGAAAAAGAGATAGTAACGTCGGTGAGAGGGGTTGCGTTGTTGGTTGTGTCGGCGACGCCGTTCATAGAGAATAG 2178 0.4619 MLSTNPYLENFPGHLQPIMNGFHSSSSSSSGTISSGDSTESSKYSNNILRYISDILMDEEDDLENKPCMLQQCLRLQAAEKSFSEVLGNSSNSPPSQGCDESNQDGDYCRSTSFESYSSFNTDNSSYEFDWVNLVGEYESSLLQASLLGGSYGTHYQNMVPLINNEEGSSPGTREKRSYQVDDDASYEQGRRGNKISATVFSDESEPPEILYEVLRIPYGRSKKYCCVEPLSKNDMLKMQNVGSNSKTGRSKNRNSNTDATVDLWTLLTQCAQAVADYDKRNAYDTLKQIRQHSSPSGDGLQRMAHYFAIGLETRLNAGTPSYPPLDMASAADMLKAYKLYVTASPLQWMTNKLATQTIKNLVQNESRVHIIDFGISYGFQWPCLIKYMSERNGAIKLRITGIDLPQPGFRPTERVEETGRRLETLCKRYKVPFEYNCIAQKWETIRVEDLKIDRDEVTVVNCFYRLKNLPDETVSVNSPRDAVLKLMRRINPKIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMMLEKGMIGRDAINVIACEGAERVERPESYKRWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNWVLHGWKGRIFHALSVWLGATPAIGNALKEPSSTKRAAADFFSRGRFHLLPSEETPTCSSTSHTLGEGRSPMRTSTSPGATSGEHEPVRKRDSNVGERGCVVGCVGDAVHRE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00406 725 MobiDBLite consensus disorder prediction 665 707 - -
Aip08g00406 725 MobiDBLite consensus disorder prediction 85 105 - -
Aip08g00406 725 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 631 IPR005202 -
Aip08g00406 725 MobiDBLite consensus disorder prediction 162 193 - -
Aip08g00406 725 MobiDBLite consensus disorder prediction 666 695 - -
Aip08g00406 725 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 631 - -
Aip08g00406 725 MobiDBLite consensus disorder prediction 170 190 - -
Aip08g00406 725 Pfam GRAS domain family 266 630 IPR005202 -
Aip08g00406 725 ProSiteProfiles GRAS family profile. 255 631 IPR005202 -
Aip08g00406 725 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00406 Aip-Chr8 3099912 3103738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00406 38 631 GRAS Transcription Factor Family AT2G29060 43.156 1.88e-156 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip08g00406 GRAS 1.3e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00406 - - aip:107612146 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00406 08 3099912 3103738 Aip08g00406 08 3099912 3103738 ECH