Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00391 ATGATAGATTTTTTGGATAAGCTGATTAACATGCATGGATGTGGATTGACTACTTCTCTTCCTCTTCCTCCTCCTTTGACTGCACCCAACAACTTCCTTTCTCAAATTAGCACACAACTATGCTTGAGATCCCTTCTTTCCATCCAGACCCAAAACCCGTCACTTTCTTTCATACCCACTTGCAAATATAGATATACAAGTGCTTTCAGATACGGGAATCATGGGATTCGGAACAATCGTGGCAACAGACCAGTGGCTATGAGAGCAAGCCGCGGAGAATCTCCGTACGAGATTCTGGGAGTGTCCCCATCCGCAACTTCCGACGAAATCAAAAGGGCCTATAGGAAACTTGCCCTCAAGTATCACCCTGATGTTAACAAAGAGGATAAGGCGCAGGAGAAGTTTATGAGGATAAAGCATGCATACAATACCCTGATAAATTCTAATTCCCGCAGAAAATATGATTTTGGAAATCGTGGTTCTGATTATTCATATTCCTCTTCTCAAAGAAGCCAAAGTAGGAGCACACAAGAAGAAGAATTTTATGGATTTGGTAATTTTGTCAGGGATGTTCAAATAACAATAGAGGACTTTTTTAAAGATCTTCAAGAAGAATTCAAGAACTGGGAAGCTAATGCTGCTTCAGAGGGACAGCCAAAGAGCCTATGGGAGGAAATAGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAGTATTGTTGATACAGAAGCTGATCAAAATAACAATGAAACAACTCAGGGTGGAAATAAATCTAACATGTCTGGGACAGGCACACCGGATAATGAAGCTGGCAAAGGAAAAACAAGCATTGAGGATAACCTTGATGATGTAGAAGCCACTCTGGCCAAGTTAAAGAAGGAACTAGGCTTATAG 906 0.4106 MIDFLDKLINMHGCGLTTSLPLPPPLTAPNNFLSQISTQLCLRSLLSIQTQNPSLSFIPTCKYRYTSAFRYGNHGIRNNRGNRPVAMRASRGESPYEILGVSPSATSDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSNSRRKYDFGNRGSDYSYSSSQRSQSRSTQEEEFYGFGNFVRDVQITIEDFFKDLQEEFKNWEANAASEGQPKSLWEEIAEIGEEFVEFLEKELSIVDTEADQNNNETTQGGNKSNMSGTGTPDNEAGKGKTSIEDNLDDVEATLAKLKKELGL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00391 301 Gene3D DnaJ domain 92 214 IPR036869 -
Aip08g00391 301 Coils Coil 278 298 - -
Aip08g00391 301 CDD DnaJ 95 147 IPR001623 -
Aip08g00391 301 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 66 299 - -
Aip08g00391 301 Coils Coil 234 254 - -
Aip08g00391 301 Pfam DnaJ domain 95 155 IPR001623 -
Aip08g00391 301 MobiDBLite consensus disorder prediction 245 283 - -
Aip08g00391 301 MobiDBLite consensus disorder prediction 157 179 - -
Aip08g00391 301 MobiDBLite consensus disorder prediction 246 274 - -
Aip08g00391 301 PRINTS DnaJ domain signature 96 114 IPR001623 -
Aip08g00391 301 PRINTS DnaJ domain signature 114 129 IPR001623 -
Aip08g00391 301 PRINTS DnaJ domain signature 130 150 IPR001623 -
Aip08g00391 301 ProSitePatterns Nt-dnaJ domain signature. 135 154 IPR018253 -
Aip08g00391 301 SMART dnaj_3 93 150 IPR001623 -
Aip08g00391 301 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 66 299 - -
Aip08g00391 301 SUPERFAMILY Chaperone J-domain 56 154 IPR036869 -
Aip08g00391 301 ProSiteProfiles dnaJ domain profile. 94 158 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00391 Aip-Chr8 2989578 2991880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00391 96 155 C2H2 Transcription Factor Family AT1G74250 39.394 2.25e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00391 - - adu:107461539 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00391 08 2989578 2991880 Aip08g00391 08 2989578 2991880 ECH