Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00374 ATGTTTCATCCAGTCCACCTCATTGAACAAAGATCCAGTCATAAGGAGCCACGTGTCAGTGCCATATGGACAACTCTCGAGCTTCGCTTCAAGGAACTTGCAAAGTTCAAATTCACAGTAGCCACCAATTCCCCACCTGCAAACAAAGCCTCAAATCCAAATCGTGTATCCACATCCAACGGCCCACATTATCTCCATCACCCAAACATTACAAATTTCCCTCCACACAGACCGCACTACTTCACATGGAAAAAACTATCCAACGTAAGTAGCACAGTCAGAGCTTCAGCTGCCGGAGCTTCTGTAAATCCGGCACCAGCACCGGCATGGCAAGGAGCAGCCATAAAGCCTCTCCTAGCTTCCATAGCAACTGGAGTTATCCTCTGGTTTGCTCCCGTACCTAGCGGCCTGTCGAAAAACGCTTGGCAGCTGCTGGCAATTTTCCTGGCCACTATCGTCGGAATCATCACTCAACCACTGCCACTTGGTGCAGTGGCGCTGTTAGGCCTCGGCATCTCTGTCCTCACCAAAACCTTGACGTTCGCGGCGGCATTCTCAGGTTTCGGCGATCCCATCCCCTGGCTCATCTGCTTCGCTTTCTTCTTCGCCAAAGGATTCATCAAGACCGGCCTCGGAAACCGCGTCGCCTACCAGTTCGTCTCCCTCTTCGGTAGCTCCTCGCTAGGGTTAGGTTACAGCCTAGTGTTCAGCGAGGCCTTGCTTGCGCCAGCTATTCCATCAGTTTCAGCGAGAGCCGGCGGGATCTTCCTGCCGCTGGTGAAGTCTCTGTGCGCCGCGTGTGGTAGCAACCCCGGCGACGGAACAGAGAGGAGGCTAGGTGCGTGGTTATCGCTGACGTGTTTCCAAACTTCGGTAATATCTTCGGCTATGTTCCTGACCGGGATGGCGGCTAACCCTCTGTGCGCAAATCTGACTCAGAGCTCAATCAATCAAACAATTGGTTGGTTGGATTGGGCCAGAGCCGCCATTGTTCCGGGTTTAGTGTCGTTGGTGTTAGTCCCTTTGATATTATACATCATTTACCCGCCAACTCTGAAATCAAGCCCCGATGCTCCCAAGCTTGCGCGTCAGAAGTTGCAGAGCATGGGTCCTATGTCTTCTAATGAGAAGATTATGACTGCTACCTTACTTCTTACGGTGGGACTTTGGGTCCAAACTGTAGTCAAGTTTGTGGGAGGATTAGGTCTGTCATGGCAACTATCATTTGGGATTCTAGTACTTTTGTATTTCTACTCGCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTGCCTTCCTCTCTGTCGCCACTGCGCTGGGGACTCCTCCATTCTTTGGAGCCATGGTGCTGTCATTCCTGTCCAATCTCATGGGTGGCCTTACCCACTATGGAATTGGCTCAGCTCCTGTTTTCTATGGAGCCAACTATGTGCCCCTTGCTCAATGGTGGGGCTATGGCCTGCTTATTAGTATCGTTAATATTTTTATCTGGCTGGGTCTTGGGGGTGTTTGGTGGAAAGTCATTGGCTTGTGGTAA 1551 0.51 MFHPVHLIEQRSSHKEPRVSAIWTTLELRFKELAKFKFTVATNSPPANKASNPNRVSTSNGPHYLHHPNITNFPPHRPHYFTWKKLSNVSSTVRASAAGASVNPAPAPAWQGAAIKPLLASIATGVILWFAPVPSGLSKNAWQLLAIFLATIVGIITQPLPLGAVALLGLGISVLTKTLTFAAAFSGFGDPIPWLICFAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCAACGSNPGDGTERRLGAWLSLTCFQTSVISSAMFLTGMAANPLCANLTQSSINQTIGWLDWARAAIVPGLVSLVLVPLILYIIYPPTLKSSPDAPKLARQKLQSMGPMSSNEKIMTATLLLTVGLWVQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGLLISIVNIFIWLGLGGVWWKVIGLW 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00374 516 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 392 516 IPR030676 -
Aip08g00374 516 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 392 516 - -
Aip08g00374 516 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 79 391 - -
Aip08g00374 516 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 132 394 IPR001898 GO:0016020|GO:0022857|GO:0055085
Aip08g00374 516 Pfam Sodium:sulfate symporter transmembrane region 402 516 IPR001898 GO:0016020|GO:0022857|GO:0055085
Aip08g00374 516 Pfam Sodium:sulfate symporter transmembrane region 117 391 IPR001898 GO:0016020|GO:0022857|GO:0055085
Aip08g00374 516 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 79 391 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00374 Aip-Chr8 2881546 2883544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00374 392 515 Antiporters AT5G12860 89.516 1.31e-69 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00374 - - vun:114169835 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00374 08 2881546 2883544 Aip08g00374 08 2881546 2883544 ECH