Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00363 ATGAATAGTTCTGGTTTGGGAGGTAGTTTTTTAGGTGGTCCTGCTGGGGGTATCTTGGACCTCGAATTGCCATTTCATAGACACCAACAACAATCCCAGATGGGTCATCCGTCGGTGACGGGACAGCATCACTTGAATATGAGGACTGATCTGGAAAATGATCACCCAATTGGCCTCATGGAACTCAAAGGGTCGAATGCGGGGGTGAATTTTGGTAAAGGAAAGGGAATTGCTTCTTCTAATCCTGCCAATAGTAATGATTTGAGCGATGATGACGATGCAGAAGATGGGAATTGCGAGAATTTTGATGGTGGGAAGAGCAAAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACAGACAATGTGGTTCAGCTTCTTATAGCTGTGGTGAGCTGTGTGGGGGACGATGGAACCATTAATGGCACGGATGGTCATAAAAGGAAATCCGGTGTCTTGCAAAAGAAGGGCAAGTGGAAAACCGTCTCCAAGATAATGATAAGCAAGGGTTGTCATGTGTCGCCGCAGCAGTGCGAGGACAAGTTTAACGACTTAAATAAGAGGTACAAGAGGTTAAATGATATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTACACTGATGGATTCGATGCCAAACCTCTCAGCTAAGGCAAAGGATGATGTTAGAAAGATACTGAGCTCAAAACACCTGTTTTATAAGGAGATGTGTGCTTACCATAACGGGCAGAGGATACCAAACTTCCATGATCTTGACTTACAAGGTTATTCTTTGGATCATGGCAGGGACTCCAGAGATAACAATGGCTCTGAGGATGAAGCTGAGGATAACAATGAAAGTGATGATGATGATTTGGATAATGCACATGGGGATGGAGAGAGGGCGGATGAGTTCTGTGATAGAAGAAAATCGAGCGAGGAGGATTTCCATTTTTGGCCACAATCTATTGAGATGGACAAATTTGAAGTTGAAATGGCAAGGGTTTTTCAAGACCCAACAAAGTCAGTGAGGGAACGAAGAGAGTGGATCAAGATAAAGATGTTGCAGCTTCAAGAGCAAAGAGTGAGCTACCAAGTGCAAGCACTTGAACTCGAAAAACAACGATTTAAGTGGTTGAGATACTGCAGCAAGAAGGATAGAGAGCTGGAGAGGCTGAGGTTGGAGAACGAGAGGATGAAATTGGAAAATGAGCGCAGGGTCTTGAAACTGAAGCAGAAAGAGCAGGAAACAGATTTAAGTAGGCCTGAGATGTCCTTAGACCCTGCTTCTCTCGGAATTAATAGACCGCAAGGGAGGGAACATTTCAACTTTAGCTGA 1323 0.446 MNSSGLGGSFLGGPAGGILDLELPFHRHQQQSQMGHPSVTGQHHLNMRTDLENDHPIGLMELKGSNAGVNFGKGKGIASSNPANSNDLSDDDDAEDGNCENFDGGKSKKGSPWQRMKWTDNVVQLLIAVVSCVGDDGTINGTDGHKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPTLMDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNFHDLDLQGYSLDHGRDSRDNNGSEDEAEDNNESDDDDLDNAHGDGERADEFCDRRKSSEEDFHFWPQSIEMDKFEVEMARVFQDPTKSVRERREWIKIKMLQLQEQRVSYQVQALELEKQRFKWLRYCSKKDRELERLRLENERMKLENERRVLKLKQKEQETDLSRPEMSLDPASLGINRPQGREHFNFS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00363 440 MobiDBLite consensus disorder prediction 73 113 - -
Aip08g00363 440 MobiDBLite consensus disorder prediction 274 288 - -
Aip08g00363 440 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 13 416 - -
Aip08g00363 440 Coils Coil 377 413 - -
Aip08g00363 440 MobiDBLite consensus disorder prediction 261 303 - -
Aip08g00363 440 Coils Coil 349 369 - -
Aip08g00363 440 PANTHER F16F4.11 PROTEIN-RELATED 13 416 - -
Aip08g00363 440 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Aip08g00363 440 MobiDBLite consensus disorder prediction 289 303 - -
Aip08g00363 440 Gene3D - 118 190 - -
Aip08g00363 440 MobiDBLite consensus disorder prediction 407 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00363 Aip-Chr8 2782153 2784740 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip08g00363 Myb_DNA-bind_4 3.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00363 - - ccaj:109806698 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00363 08 2782153 2784740 Aip08g00363 08 2782153 2784740 ECH