Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00361 ATGACAAATAATCCTTACTACTTGAACAACAATGGTTATTGGTTCGACCTTAATTCTCCAAGCAGCACCTATGTTTTTGGTTCCAATCATCACGAGTCTCCACCAAGAATTGAAGCTCTTCCTCTCCTGAATAAGCTAAGCCCTAGCAGGAGTACTAGTAGTAGGCCTCAAGATCTGGAATCTTCGTTTGGTGCCATGGAAGTGAAGGAGAAGCACAAGAGAGGAGATGACGGCGATGAGAGTGTGACGGTGGCTTTGCACTTAGGGCTTCCAGAAACAAGAAGTAAGAATATGACATGCGAAGAAGAAGTTTCAGCAGCGTCAGTGTCACAAGAACAAGAAGAAGGAGGAGGAGGAGGAGGAAGAGGTTCTGATTCAAATTCAAATTCGATGAATCGAGGTCAATATTGGATCCCAACACCGGCTCAGATTCTGATTGGTCCAACACAGTTCTCTTGCCCCCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATATAGGAAGGGGCCAGAATCACTGAGGGGAACACAACCAACAGCAATGCTTAGGCTTCCATGCTACTGCTGTGCACCAGGGTGTAAGAACAACATTGATCATCCAAGAGCCAAGCCTCTCAAAGATTTCAGAACCCTCCAAACACACTACAAGAGGAAGCATGGAATCAAGCCTTTCATGTGCAGGAAGTGTTGCAAGGCCTTTGCTGTGAGAGGTGATTGGAGGACTCATGAGAAGAACTGTGGGAAGCTTTGGTATTGTTCTTGTGGCTCTGATTTCAAGCATAAGAGGTCTCTCAAGGATCATATCAAGGCCTTTGGGAATGGTCACAAGGCTTATGGCATTGATTCTCTTGATCAAGATGATAATGAACCTGGCTCTGAAATTGACCAAGAAAATGATCATCTTTCTAATTCTACTACTCATCATCATCATCATACTTGA 972 0.4424 MTNNPYYLNNNGYWFDLNSPSSTYVFGSNHHESPPRIEALPLLNKLSPSRSTSSRPQDLESSFGAMEVKEKHKRGDDGDESVTVALHLGLPETRSKNMTCEEEVSAASVSQEQEEGGGGGGRGSDSNSNSMNRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDSLDQDDNEPGSEIDQENDHLSNSTTHHHHHT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00361 323 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 19 310 - -
Aip08g00361 323 MobiDBLite consensus disorder prediction 93 134 - -
Aip08g00361 323 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 178 IPR013087 -
Aip08g00361 323 SUPERFAMILY beta-beta-alpha zinc fingers 217 255 IPR036236 -
Aip08g00361 323 Gene3D Classic Zinc Finger 150 173 - -
Aip08g00361 323 Gene3D Classic Zinc Finger 232 307 - -
Aip08g00361 323 MobiDBLite consensus disorder prediction 293 323 - -
Aip08g00361 323 PANTHER ZINC FINGER PROTEIN WIP2 19 310 IPR043584 GO:0003700|GO:0010468
Aip08g00361 323 MobiDBLite consensus disorder prediction 46 65 - -
Aip08g00361 323 MobiDBLite consensus disorder prediction 46 60 - -
Aip08g00361 323 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00361 Aip-Chr8 2767712 2769411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00361 82 313 C2H2 Transcription Factor Family AT3G57670 70.270 8.08e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip08g00361 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00361 - - gmx:100789416 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00361 08 2767712 2769411 Aip08g00361 08 2767712 2769411 ECH
Aip08g00361 08 2767712 2769411 Aip03g00589 03 5735689 5737703 ECH
Aip06g00359 06 4208694 4210421 Aip08g00361 08 2767712 2769411 ECH
Aip02g01788 02 78051139 78058772 Aip08g00361 08 2767712 2769411 ECH
Aip08g00361 08 2767712 2769411 Aip03g00589 03 5735689 5737703 PCT