Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00343 ATGGAGAACAACCGGACAACAGGAAAAGGGAAAGGCAAAGCAAAAACAGAGGAGAGAGGACTAGGAAATCGTCAAGTTCTTGGAGATATTAGTAACCTTGAAGTGCTTAAAACTACTGATGGCAACCACATTTCACGGCCTATCACAAGGAAACTTTATGCAAAACTTTTGGCAAATTCACAATCTACTGCAAACTTGCTGCTGGATCCAAAAGCCCAATCTAACGAAGGAGGAGCTGCACAAGGGAATAAGAACTTTGTTCAACTTGAATTAGACAGTACAGCAAGTGTTCACAAGAAGCATGGTTTAGAGGAAAGGGGTGAGCATGATAATGAAAGAAAGTTTAAGAAAAGATCTTGTAGGAAAGTCATGACTCTAACTGCAGAAATTACTGCACAGAGCAAGGCTGCTAGAGAAGTCTTGTCTAAGCCTGATGGACAGCATGTTGACATCGATGCAGACAATGGTAATATTGACTTGGCAGTGGCTGAGTACCTTGATGATTTATACATATTCTATAAGCTAACAGAAGATGAGAGCCGAATTTCAGATTACATGAACTCACAGAATGAAATCAATGAGAAGATGAGGTCCATTACCGTGGACTGGCTCATTGATGTGCACTGGAGATTTAACCTAATGCCTGAGACAATCTATCTTACCATAAACATAATCGATCGATACCTCTCGTTGACAGTTATACCAAAAGCAGAATTACAGTTGGTGGGCATTTGCTCATTGCTCCTAGCTTGCAAATATGAAGAGATAGTAACTCCTAAGGTTAAGGTCTTTGCTAAACTAACAGATGATGCTTACACCAACCAACAGATATTGGACATGGAAAATGCAATCCTTGAAAAGTTAGAATGGTATCTAACAGTTCCCACACCCTACATGTTTTTAGATCGATTCATCAGAGTTCCTGAGCAGCCAGATGTTGAGCTGAAGAACATGGTTTTCTTCCTGGCTGAACTTGGTCTTATGCACTATCAAATTGTTCTGCACTGCCCCTCATTGATAGCTGCAGCAACAGTCTTTGCTGCACGTTACACACTCAATCGGAATCCATTCTGGACTGAAATTCTAAAGCTCAGGACTGGCTATGTTGCAGAACAGATCATGGAATGTTCAAAGATGTTAATCAGATTTCAGTCAAGTGCTGCGGATTCTAAATTGGATACCGTGATCCAAAAATTCTCAAGTCCAGAGAGAGGAGCTGTTGCACTTTTACCTCCGCTAGATCCCAAACATCAAGTCAATAATCTCACTTGA 1272 0.408 MENNRTTGKGKGKAKTEERGLGNRQVLGDISNLEVLKTTDGNHISRPITRKLYAKLLANSQSTANLLLDPKAQSNEGGAAQGNKNFVQLELDSTASVHKKHGLEERGEHDNERKFKKRSCRKVMTLTAEITAQSKAAREVLSKPDGQHVDIDADNGNIDLAVAEYLDDLYIFYKLTEDESRISDYMNSQNEINEKMRSITVDWLIDVHWRFNLMPETIYLTINIIDRYLSLTVIPKAELQLVGICSLLLACKYEEIVTPKVKVFAKLTDDAYTNQQILDMENAILEKLEWYLTVPTPYMFLDRFIRVPEQPDVELKNMVFFLAELGLMHYQIVLHCPSLIAAATVFAARYTLNRNPFWTEILKLRTGYVAEQIMECSKMLIRFQSSAADSKLDTVIQKFSSPERGAVALLPPLDPKHQVNNLT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00343 423 CDD CYCLIN 293 380 IPR013763 -
Aip08g00343 423 Pfam Cyclin, N-terminal domain 176 292 IPR006671 -
Aip08g00343 423 Pfam Cyclin, C-terminal domain 295 412 IPR004367 -
Aip08g00343 423 Gene3D - 287 420 - -
Aip08g00343 423 PANTHER CYCLIN-B1-4 17 412 - -
Aip08g00343 423 CDD CYCLIN 196 285 IPR013763 -
Aip08g00343 423 MobiDBLite consensus disorder prediction 1 23 - -
Aip08g00343 423 SUPERFAMILY Cyclin-like 294 414 IPR036915 -
Aip08g00343 423 SUPERFAMILY Cyclin-like 161 290 IPR036915 -
Aip08g00343 423 PANTHER CYCLINS 17 412 IPR039361 -
Aip08g00343 423 PIRSF Cyclin_A_B_D_E 1 422 IPR039361 -
Aip08g00343 423 MobiDBLite consensus disorder prediction 1 22 - -
Aip08g00343 423 SMART cyclin_7 202 286 IPR013763 -
Aip08g00343 423 SMART cyclin_7 299 382 IPR013763 -
Aip08g00343 423 Gene3D - 182 286 - -
Aip08g00343 423 SMART Cyclin_C_2 295 413 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00343 Aip-Chr8 2598904 2602103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00343 115 414 Core Cell Cycle Gene Families AT2G26760 51.656 5.11e-107 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00343 K21777 - jre:109013760 410.223