Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00326 ATGAACAATAGTTTCAATCAGCACAAGATGCTGTGTTATAAGCGCAAAAGAGCTCTGAAGACTACATCGACCCCTGGACGTGAAGGTCTAAGACCTCTCCATTTGACAAGGGCTACTGTAAGGCAACAATTGATTTCGGAATCAGATGATAAACAGGAACTTGCAGAAGAGAAGGTTGGGAAAGATGAAACAGAAAATGGAAATGTTGATGGCGAGAATGAGATTGATGAAGATGTTGAGGATGAAGGAAATGAAGATGGTGATGATGAAGGCGGTGAAGAAGAGCAGGTTGGGAGAAGACGTTATGATCTTCGAAATCGTCCAGATGTCCGCAGGTCCTCCATGGCAGAATGTAAGATCCAACCGAGATCTCCACAAAGAGTGCTACATCAAGGCATGGGCACTAAGGTTAACAAGGGTGTAAAGAAGGGTGGATCACGAGTGCAGAAGCGTTGTTGGTTAAGGCCTGCATATTCTGATGATTCCCTTATTGTGGATGAGCTGAACCAATATCCTGCTATTCCATGGGGTCATGGGGACAGCAGACCTTGCCAACCATGGCTTTTTGGAGGATTAGACATGCATGGGATAACAACTTGGGGATTAAATGTTGCTGCCTCAGGTTGGGTTCATGAAGGAGATGCTTTTTCCACCTCAGTAACTGGGGTTCAAACTGCTGGTCCAAGCTCTAAGGGTGGGGCAGATATCCAACCTTTGCAGGCCGTTGATAGTGCCAGTTTTGATGATATAGGGGGGCTCTCTAAGTACATTGATGCTTTGAAGGAAATGATTTTCTTTCCCTTGTTGTATCCTGAATTCTTTGCAAGTTATCATATCACACCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACAGGTAAAACTTTGATTGCAAGAGCTCTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTCAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAATGGGTTGGTGAGGCTGAAAGACAACTGAAACTACTTTTTGAGGAAGCTCAAAAGAATCAACCTTCTATCATATTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAATCAAGAGCAGATTCATAATTCCATTGTTTCCACCTTGCTAGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTCTGATTGGAGCAACCAACAGGATTGATGCCATTGATGGAGCCTTGCGGCGCCCTGGTAGATTTGATCGGGAATTTAAGTTTCCATTGCCTGGTTGTGAGGCACGTTCTGAAATATTAGACATCCACACACGCAAGTGGAAACATGCTCCTTCAGATGAACTGAGAATGGAACTTGCATCTAGTTGTGTAGGATATTGTGGTGCCGACCTAAAGACCCTCTGTACTGAAGCTGCTATTTGTGCATTTCGTGAAAAATATCCACAAGTCTATACTAGTGATGACCAATTTCTCATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTTACTGAAGCTATGTCAACAATTACTCCTGCTGCTCATAGGGGTGCAGTTGTGCACTCTAGGCCATTGTCTCTAGTTGTTCGACCATGTCTTCGCAGGCATCTAGAGGCAGCCATGGGTATTGTATCTGATATTTTCCTTCCAGTTTCAGTTGCATCAGAATTTATTAAACTATCAACGCATGCCTTTGGGCGCGCAATTCCACTTGTGTATCGACCTAGACTTCTACTTTGTGGAAGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCAGTTTTACATGAACTGGAAAAGTTTCCTGTTTTTTCATTAGGTATTTCAGTTCTTGTATCAGATTCAAGTGCAATAACACCAGAGGAGGCATTGATTCGTATATTTAATGAAGCTAGACGAACAACGCCGTCAATTCTCTATTTACCACAGTTTGATGTGTGGTGGGAAACTGCACATGAACAGCTCCGGGCTGTTCTCCTAACCTTACTAGAAGAATTGCCATCTGACTTGCCTATATTACTGTTTGGAACATCATCAGTCCAGCTTGCTGAAGTTAAAGAAGTGCCTATTTCAGTTTTCCCTCATGATTCAGTTTATCAAGTGAACATACCATCAGCCGAAGATAGGATGTTGTTTTTTACTGATTTAGTGGAAGCTGTTTTGTCGGTCTTTTCTGGGATAATGAACAAGAAACCCCTGGACACAGGATGCTTTTCTGAACTTCCCAAGGCACCTAAACTAGCAAGTGGTCCAAAGGCATCCGAACTTAAAGCAAAGGTGGAAGCTGAGCAACATGCACTCCGCAGATTGCGCATGTGCCTTAGAGATGTTTGTAACAAGATATTATATGACAAGCGATATAATCTCTTCCATTATCCAGTCTCAGACGAAGATGCTCCTAACTATCACTCAATTATCCAGAACCCGATGGACATGGTAACCATGTTGCAGCGTGTTGATAATGGCTGGTATATTACACGTTCTGCATTCCTCCAGGACATCGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGATTACAACGGTGCTCGGATTGTGAGTAGAGCTTGTCAGCTCCGTGATGTGGTGCATGGGATGATCTCACAGATGGATCCAGCATTAGTTGCATACTGTGACAAGATTGCTGCCCAGGGCGGCCCGGTTCATTTGTCTAATGAATTAAGGGGGTCTACATTCCCTGCTACTCCCGTTGTACAACTGGGAACTGCCACTAGATTGAGTGCTCGACTTCGTAATGTCGAACCAGAGGTTAGTGTGGATCAGAGCTATGAAGCATTGAAGCATACTAAGAAGAGTTCTGATGTTGCACGTGGAGCAAAAGATAAGTCAGGACAAGACCCTTTACCATCCAAGAGTCAAACCCAATCAACTGATGGGAATTTGCATGGAACGGGTACAAATGAAAGTGTTCATGGTAGCAATCTTGAAGACGCCACGATATCAGATACTGAACTTTCAACAAGATTGCAGTCTATTAAGCAGCTTTTTGTCGAGCGCAGCGACGGTTACAGCATTCCACAGCTCGAAAGGCTCTATTCAAGAATCATGAAGAGGGTTTCCCAAACCAAACTTGATTGTAAGACCTCAGCTGTGAGTTTTTTATTAAACTTTGTTGAGGATGGTGCAAATTTTTAA 3156 0.4373 MNNSFNQHKMLCYKRKRALKTTSTPGREGLRPLHLTRATVRQQLISESDDKQELAEEKVGKDETENGNVDGENEIDEDVEDEGNEDGDDEGGEEEQVGRRRYDLRNRPDVRRSSMAECKIQPRSPQRVLHQGMGTKVNKGVKKGGSRVQKRCWLRPAYSDDSLIVDELNQYPAIPWGHGDSRPCQPWLFGGLDMHGITTWGLNVAASGWVHEGDAFSTSVTGVQTAGPSSKGGADIQPLQAVDSASFDDIGGLSKYIDALKEMIFFPLLYPEFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSNQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFKFPLPGCEARSEILDIHTRKWKHAPSDELRMELASSCVGYCGADLKTLCTEAAICAFREKYPQVYTSDDQFLIDVDSVKVEKYHFTEAMSTITPAAHRGAVVHSRPLSLVVRPCLRRHLEAAMGIVSDIFLPVSVASEFIKLSTHAFGRAIPLVYRPRLLLCGSEGTGLDHLGPAVLHELEKFPVFSLGISVLVSDSSAITPEEALIRIFNEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDLPILLFGTSSVQLAEVKEVPISVFPHDSVYQVNIPSAEDRMLFFTDLVEAVLSVFSGIMNKKPLDTGCFSELPKAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNKILYDKRYNLFHYPVSDEDAPNYHSIIQNPMDMVTMLQRVDNGWYITRSAFLQDIDLIVSNAKAYNGEDYNGARIVSRACQLRDVVHGMISQMDPALVAYCDKIAAQGGPVHLSNELRGSTFPATPVVQLGTATRLSARLRNVEPEVSVDQSYEALKHTKKSSDVARGAKDKSGQDPLPSKSQTQSTDGNLHGTGTNESVHGSNLEDATISDTELSTRLQSIKQLFVERSDGYSIPQLERLYSRIMKRVSQTKLDCKTSAVSFLLNFVEDGANF 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00326 1051 Pfam ATPase family associated with various cellular activities (AAA) 285 420 IPR003959 GO:0005524|GO:0016887
Aip08g00326 1051 PRINTS Bromodomain signature 797 813 IPR001487 GO:0005515
Aip08g00326 1051 PRINTS Bromodomain signature 813 831 IPR001487 GO:0005515
Aip08g00326 1051 PRINTS Bromodomain signature 831 850 IPR001487 GO:0005515
Aip08g00326 1051 MobiDBLite consensus disorder prediction 924 981 - -
Aip08g00326 1051 MobiDBLite consensus disorder prediction 953 981 - -
Aip08g00326 1051 MobiDBLite consensus disorder prediction 928 948 - -
Aip08g00326 1051 PANTHER AAA DOMAIN-CONTAINING 12 1029 IPR045199 -
Aip08g00326 1051 Gene3D - 757 885 IPR036427 GO:0005515
Aip08g00326 1051 SMART AAA_5 281 422 IPR003593 -
Aip08g00326 1051 MobiDBLite consensus disorder prediction 69 92 - -
Aip08g00326 1051 MobiDBLite consensus disorder prediction 93 116 - -
Aip08g00326 1051 ProSiteProfiles Bromodomain profile. 788 850 IPR001487 GO:0005515
Aip08g00326 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 508 IPR027417 -
Aip08g00326 1051 Gene3D - 548 714 IPR027417 -
Aip08g00326 1051 Pfam AAA+ lid domain 448 484 IPR041569 -
Aip08g00326 1051 SUPERFAMILY Bromodomain 761 877 IPR036427 GO:0005515
Aip08g00326 1051 Gene3D - 244 513 IPR027417 -
Aip08g00326 1051 MobiDBLite consensus disorder prediction 44 68 - -
Aip08g00326 1051 MobiDBLite consensus disorder prediction 16 126 - -
Aip08g00326 1051 CDD AAA 281 420 - -
Aip08g00326 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 569 784 IPR027417 -
Aip08g00326 1051 CDD Bromo_AAA 765 875 - -
Aip08g00326 1051 Pfam Bromodomain 773 846 IPR001487 GO:0005515
Aip08g00326 1051 PANTHER BNAC08G44480D PROTEIN 12 1029 - -
Aip08g00326 1051 ProSitePatterns AAA-protein family signature. 390 408 IPR003960 GO:0005524|GO:0016887
Aip08g00326 1051 Gene3D - 421 506 - -
Aip08g00326 1051 SMART bromo_6 765 872 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00326 Aip-Chr8 2420713 2425416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00326 250 485 Calmodulin-binding Proteins AT3G56690 38.983 2.85e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00326 K22531 - gmx:100787765 1526.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00326 08 2420713 2425416 Aip08g00326 08 2420713 2425416 ECH