Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00308 ATGGACAAGGACAAACCTCTTGTTCATGGTGGAGGTCTTCCACCTCCATCAGGACGTTATTCGGGTTACTCACCCACTGGAAATGCCTTCAATGTGAAATCCGAGCCGTCTTCATCGTCGTCATATCCTCCAATGGTTCCAGGTTCTAGCCCAGACTCCAGTCACTTTGGTCATGGAATGTCCTCAGATTCTAGTGGATTTAGTCACGATATTAGCAGAATGCCCGATAATCCTCCAAGAAATAGGGGACACAGGCGTGCTCATTCAGAGATTCTAACCCTACCTGATGATATCAGCTTCGACAGTGACCTTGGTGTCGTTGGAGGTGCCGATGTGCCGTCGTTTTCTGACGACACAGAGGAGGACTTACTTTCAATGTACCTCGATATGGATAAATTCAATTCATCATCTGCTACATCAACATTTCAAATGGGTGAGCCATCTAATGCTGCTGCAGCTTCAGGTTCGGTACCCACATCAACTCCTACATCAGGAGGGCCTACCTCTTCTGCAGAGAACAGTGTCCTTGGTAACAATGAACGGCCTAGAGTTAGACACCAGCACAGCCAATCCATGGATGGGTCAACAACCATCAAACCTGAGATGCTCGTCTCTGGTTCAGAAGACATATCTGCAGCTGATTCTAAAAAAGCAATGTCAGCTGCCAAGCTTGCCGAACTAGCCTTAATTGATCCCAAGCGTGCAAAGAGGATTTGGGCAAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAACTTGAAAGGAAGGTGCAGACATTGCAAACTGAAGCAACATCTTTGTCTGCACAGTTAACACTATTGCAGAGAGATACCAATGGACTTAATTCGGAGAACAATGAGCTGAAGTTGCGATTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCATTAAATGATGCGTTGAAAGAGGAAATTCAGCATTTGAAAATACTGACCGGTCAAGCTATGCCACCTAATAATGGAGGGCCTATGATGAACTTTGCTTCTTTTGGAGGGGGACAGCAATTCTACCCGAATAATCATGCGATGCACACACTTCTAGCTGCCCAGCAATTTCAACAGCTCCAGATTCATCCCCAGAAGCAGCAGCAGCAGCATCAGTTTCAGCAGCTTCAGCAACAGATGTTGCAGCAACAGCAGGAACAGATGCATCAACAGTCAGGAGAATTGAAAATTAGGTCATCTACACCTTCTCCTGGCCCCAAAGATAATGCATCATCAGATGTAAATCCTTCAATGGGCAAGGATTGTTGA 1296 0.4591 MDKDKPLVHGGGLPPPSGRYSGYSPTGNAFNVKSEPSSSSSYPPMVPGSSPDSSHFGHGMSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADVPSFSDDTEEDLLSMYLDMDKFNSSSATSTFQMGEPSNAAAASGSVPTSTPTSGGPTSSAENSVLGNNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDISAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENNELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNNGGPMMNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQQQHQFQQLQQQMLQQQQEQMHQQSGELKIRSSTPSPGPKDNASSDVNPSMGKDC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00308 431 Pfam bZIP transcription factor 233 291 IPR004827 GO:0003700|GO:0006355
Aip08g00308 431 Coils Coil 375 395 - -
Aip08g00308 431 Coils Coil 249 318 - -
Aip08g00308 431 MobiDBLite consensus disorder prediction 21 71 - -
Aip08g00308 431 SUPERFAMILY Leucine zipper domain 233 287 IPR046347 GO:0003700|GO:0006355
Aip08g00308 431 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 423 - -
Aip08g00308 431 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Aip08g00308 431 Gene3D - 232 285 - -
Aip08g00308 431 MobiDBLite consensus disorder prediction 137 177 - -
Aip08g00308 431 MobiDBLite consensus disorder prediction 389 425 - -
Aip08g00308 431 MobiDBLite consensus disorder prediction 1 117 - -
Aip08g00308 431 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 423 - -
Aip08g00308 431 MobiDBLite consensus disorder prediction 389 431 - -
Aip08g00308 431 MobiDBLite consensus disorder prediction 137 197 - -
Aip08g00308 431 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 294 IPR004827 GO:0003700|GO:0006355
Aip08g00308 431 MobiDBLite consensus disorder prediction 75 92 - -
Aip08g00308 431 CDD bZIP_plant_RF2 234 283 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00308 Aip-Chr8 2325483 2328621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00308 19 363 bZIP Transcription Factor Family AT1G06070 72.779 2.74e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip08g00308 bZIP_1 5.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00308 - - gmx:100786738 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00308 08 2325483 2328621 Aip08g00308 08 2325483 2328621 ECH
Aip08g00308 08 2325483 2328621 Aip03g00639 03 6239534 6242375 PCT