Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00305 ATGCCGAAGCAGATTCATGAGATTAAGGACTTCCTTCTAACTGCAAGGAGGAAGGATGCACGATCGGTGAAGATCAAGAGGAGCAGAGATGTGGTGAAGTTCAAGGTTCGATGCTCCAAGTACCTCTACACTCTCTGTGTCTTTGACTCTGAGAAAGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTGAGCGTTCAGGATCTGTGA 210 0.4619 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00305 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Aip08g00305 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Aip08g00305 69 Gene3D - 1 69 IPR038464 -
Aip08g00305 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00305 Aip-Chr8 2286114 2287062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00305 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 4.81e-44 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00305 K02923 - pvy:116107209 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00305 08 2286114 2287062 Aip08g00305 08 2286114 2287062 ECH