Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00297 ATGTCACTCCAGAGTAAGCATATCATCGTAATCTTGATGGAAAATGAAGTGGACGAGGACCCGATAGAAAATGAGACCTTTGTTGCAGAAACAGAATCCGTTCTTATTGGTGCTAGTCATTCAGACGATCAAAGAGATGTCATTGTTCTCGACGGAATAGGTTTGTTTGGTGCAATTGATTTTGATGCAATTGATTTTGATGCGTTGCGAGCTGAGGAGATTATGATGATAGAGTTTGTAGATTTGAAAACTGCTTATGACTTCTATAACGAGTACGGTCGAATTAAGGGGTTTTCCATACGGCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAGGGCGACATTATATGGCAAATTTTTGTATGCTCGCGACAAGGTGAACGAGATGCAAAGCATATTCACAGAAATGATAGGAAGATGGATCCTAGACCAGTAATGCGATGCGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCAAAGAACGGGAGATGGTACGTTGAGTTCTTCTCGGATGAACATAACCATGAAATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAACGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAGTGGCGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGCAATTGATAAGCAAAGAAGAGTTGGAGCCAGCGACACGGATAATGCACTCAAGTATTTACAAATGTTGAAGAGTCGTGACCCCTGTATGTTTTGGAAGTATTCGTTTGATGAACAACGGAGGCTCCACAATATATTTTGGTGTGATGGCGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATGCAACGTACGGGAGGAATAAGTACAAATGTCCCCTTGTGATATTCTCTGGTGTGGATCACCACATGCGCACTGTTGTGTTTGGATGTGCGGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTGCTTCGGGCATTTCTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACGGTGATCAAGCCATGAAGAGTACAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACGCAATGCGACCGCTCGATTGAAGAATTTGGGTTGCAACAAAATTCATGGGTCAATGATATGTATGAAAAAAAATATGTGGTCAAATGCCCACATTAGGGGTAAGTTCTTTGCTGGGCTCAAGACATCATCAAGGTGTGAGGCGCTAAATATGCAAATAGGAAAGTTTATACACAACGGCTACAACTTGAGGGAATTTATTGAGCATTTCCAACAGTATTTAGAGTTCATGCGTAGGAGAGTAGTGGTAGCTGATTACAAATCTGCTTATGGAGATCCGGTTGTGAAAATAAGATTGGAGGAGTTAGAGCGGTTTGCAGCAACAGTATACACACGAGAGGTCTTTCTCTTATTTCGGGAGGTGTTATTATTAGCTAGCAATGTCAGAGTAGTTTCTTCGAAGAAGACAAGCACGTGTACATTGTTTGAGGTGGCCATGCATTGCAATGGTAGATCATGGAATGTTTCGTGGGGGGAGATAGATGATGAATTCAGATAG 1677 0.4305 MSLQSKHIIVILMENEVDEDPIENETFVAETESVLIGASHSDDQRDVIVLDGIGLFGAIDFDAIDFDALRAEEIMMIEFVDLKTAYDFYNEYGRIKGFSIRRSKVGRCKKAGSEGDIIWQIFVCSRQGERDAKHIHRNDRKMDPRPVMRCGCNARIKVHVDSKNGRWYVEFFSDEHNHEMLEARFRGMMRSHRAIKTGDLHQINTMRSSGLRVPTIFRAFANQSGGFEMVGFQVKDIYNAIDKQRRVGASDTDNALKYLQMLKSRDPCMFWKYSFDEQRRLHNIFWCDGASQYDFNVFGDVMGFDATYGRNKYKCPLVIFSGVDHHMRTVVFGCAVLSKEGEESYVWLLRAFLEAMKGKAPKSVITDGDQAMKSTIKAVFPEAHHRLCSWHLLRNATARLKNLGCNKIHGSMICMKKNMWSNAHIRGKFFAGLKTSSRCEALNMQIGKFIHNGYNLREFIEHFQQYLEFMRRRVVVADYKSAYGDPVVKIRLEELERFAATVYTREVFLLFREVLLLASNVRVVSSKKTSTCTLFEVAMHCNGRSWNVSWGEIDDEFR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00297 558 Pfam MULE transposase domain 301 395 IPR018289 -
Aip08g00297 558 PANTHER OS02G0262500 PROTEIN 413 528 - -
Aip08g00297 558 Pfam FAR1 DNA-binding domain 87 181 IPR004330 -
Aip08g00297 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 402 IPR031052 GO:0006355
Aip08g00297 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 413 528 IPR031052 GO:0006355
Aip08g00297 558 PANTHER OS02G0262500 PROTEIN 73 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00297 Aip-Chr8 2220237 2222072 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g00297 FAR1 1.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00297 - - adu:107488338 962.985