Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00290 ATGGAAGGAGGAGGTCGAACGGTGGAAGAGATTTACGAGGATTTCAAGGGTCGAAGAGCTGCCATCATCAAAGCCCTCACAACCGATGTTCAGGATTTCTACAACCAATGCGATCCTGAGAAGGAGAATTTATGCTTATATGGATTACCTAGTGGGCAGTGGGAAGTAAATTTACCTGTTGAAGAAGTTCCACCAGAACTTCCTGAGCCTGTGCTGGGCATTAACTTTGCTAGGGATGGCATGCAAGAAAAGGACTGGTTATCTTTAGTTGCTGTCCATAGCGATACATGGCTGGTTGCTCTTGCCTTCTATTTTGGAGCCAGATTTGGGTTTGATAGAGCTGACAGGAAACGACTATTTAATCTGATCAATGAACTACCGACAATATNNNNNAGTCCTCAGTCTCAAACAACAGTGGCAGCAAATCTAAGTCCAGCTCCAAAGCGCGGGCTTCTGAGTCGCAGGGTAGACAGTCAAAGGCATTCCAACCAAAGGATGAGGATGAAGGAGCAGAAGAGCAAGATGATGAGGAACATGGAGAAGCCTTTTGTGGGGCATGCGGCGAGAGTACCGGTACTGATGAGTTCTGGATTTGCTGCGACATCTGCGAGAAGTGTGGTAACAAGAGAGCTCGCTGAGCAATTTCACAGCATTGAATGGAGAAGCTTTGTTGGAGTCATAACTGATCTGTTGAAGCATTGTTGA 705 0.4596 MEGGGRTVEEIYEDFKGRRAAIIKALTTDVQDFYNQCDPEKENLCLYGLPSGQWEVNLPVEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDTWLVALAFYFGARFGFDRADRKRLFNLINELPTIXXSPQSQTTVAANLSPAPKRGLLSRRVDSQRHSNQRMRMKEQKSKMMRNMEKPFVGHAARVPVLMSSGFAATSARSVVTRELAEQFHSIEWRSFVGVITDLLKHC 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00290 234 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 1 180 - -
Aip08g00290 234 Pfam Alfin 7 130 IPR021998 GO:0006355|GO:0042393
Aip08g00290 234 PANTHER CPG BINDING PROTEIN 1 180 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00290 Aip-Chr8 2171815 2175375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00290 1 129 Alfin-like Transcription Factor Family AT5G20510 75.373 1.05e-65 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00290 - - thj:104824630 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01165 09 17441555 17446973 Aip08g00290 08 2171815 2175375 ECH
Aip08g00290 08 2171815 2175375 Aip08g00290 08 2171815 2175375 ECH
Aip08g00290 08 2171815 2175375 Aip09g01165 09 17441555 17446973 PCT