Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00289 ATGTCTAGCAGCACAGCTGGTCGAGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAAGAAGGGAAGCCACTGGCCATAGAAGAAGTAGAGGTAGCACCACCAGAGGCCGGTGAAGTTCGCTTGAAGATCCTCTACACTAGTCTTTGTCATTCTGATCTTTACTTCTGGAAGAGCAAGGGGGGTAGGAATTTGTTGTTTCCTCGCATACTCGGTCATGAAGCTGCAGGGATTGTGGAGAGCATAGGGGAGGGTGTGACAAATCTGAAGCCAGGAGATCATGTGCTACCTGTGTTCACCGGAGAGTGTGGCGAATGCCGAAGCTGCAAGTCTGAAGAGAGCAACCTCTGTGAAGTCCTCAGGCTCAACACTGATACTGGTGTCATGCTAAGTGATGGAAAATCAAGATTCTCCAAAGATGGAAAACCCATTTACCACTTCCTTGGAACTTCCACATTCAGTGAATACACTGTCTCACATGCTAAGTGTGTTATAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTCTCAGTTGTGGAATCTGCACAGGACTTGGTGCAACCTTAAATGTGGCAAAACCAAAGCCCGGTTCTACTGTTGCTGTCTTTGGATTGGGAGCAGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTTTCTGGTGCATCAAGAATCATTGGAGTTGATATACTTTCTAGCAGACAGGAACAAGCCAAAAGTTTTGGAATCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTGCAACAGGTGATTGTTGAAATGACCGATGGAGGAGTTGATCGCGCTCTAGAATGCACTGGACACGTAGAAGTCGCGATTGCAGCATTTGAATCTGTTCATGATGGTTGGGGTGTTGCTGTGCTTGTTGGTCTACCAAGCAGTGAAGATGAATTCAAAACAAAATCCATCAACTTATTGTATGAGAGGACTGTTAAGGGTACCTTCTATGGAAACTACAAACCACTCTCTGATATTCCCTCTGTTGTGGAGAAGTACATGAACAAAGAGCTAGAATTGGAGAAATTCATCACTCACTCAATCCCATTCTCTGAGATCAATAAATCATTTGATTTAATGCTGAAAGGAGAGTCAATTAGAGCGCAGAATGTCAAACCAGTAGTCGAACTCCACTTCGGTCTTCGCATATGCGGCGTTCACAAGAAGCCTCCGGGAATCTTTTCCCTTGAAGGTGAGGGCGAAATTAGCTGCAACGTGTCGAATGCAGAACGCCCTGTATGCGGCCGGAGGTTCGAAATTTCCGGCGCCGGTGGCCAGGATGAAGACGCTGATGTTGCTGGGTTTTTTCTGGGTTTGTGGCGAATTGAATTGGGTCGGTTTAAGAAAGTGGCGAAGATGAACTTGGGTGCTGCCAAGGAAGAATCGACACCAGAGGTTCATGTCCCAGCCGATATTGATTGGCAGAAGCTCGATAAATCCAAGTTCTTCTTCCTCGGCGCAGCACTTTTCTCTGGGGTTTCAGCAGCACTGTACCCCGTTGTGGTATTGAAAACGAGGCAGCAAGTTGCTCAGTCCCAAGTTCCTTGCATCAAGACTGCATTTTCAGTGATTAGCCATGAGGGTTTTCGAGCATTGTATAGAGGGTTTGGTACCTCTTTGATGGGAACAATCCCTGCTAGAGCCATGTACATGGCTGCTTTAGAGATCACTAAGAGTAATGTAGGCACTGCCACTGTTAGGTTTGGGATAGCTGAGCCGACTGCGGCCACGATTGCCAATGCGGTGGCCGGACTGAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCGGTCGACGTAGTGAGCCAGAGGCTAATGGTTCAAGATGGTTCCAATGCAAGACAATATGCCAATGGGATTGATGCATTCAGGAAGATTCTCAGAACAGATGGTCCTAGAGGGTTGTACAGAGGTTTTGGGATATCAATTTTGACATATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAGAGAATGGTTTGGGGTGGTGTTGGATACTACTTGTGCAGCAATAAGAAGGATGATGGTGAGACAACAAATGAACTGAGGCCGGATTCGAAGACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCCGCATTAATCACCATGCCATTGGATACAATTAAGACAAGGCTGCAGGTCTTGGATGGTGATGAGAATGGGAATGGGCGTAGAGTACCAACGGTTGTTCAGACAGTGAGGAATTTAGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGTTTGGGACCAAGATGGGCTTCAATGTCTTTGTCTGCAACAACAATGATCACTACTTATGAGTTCCTTAAACGACTTTCTACAAAGAATCAGGATGTTTTGACATGA 2403 0.469 MSSSTAGRVIKCRAAVAWEEGKPLAIEEVEVAPPEAGEVRLKILYTSLCHSDLYFWKSKGGRNLLFPRILGHEAAGIVESIGEGVTNLKPGDHVLPVFTGECGECRSCKSEESNLCEVLRLNTDTGVMLSDGKSRFSKDGKPIYHFLGTSTFSEYTVSHAKCVIKINPAAPLDKVCVLSCGICTGLGATLNVAKPKPGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDILSSRQEQAKSFGITDFVNPKDHDKPVQQVIVEMTDGGVDRALECTGHVEVAIAAFESVHDGWGVAVLVGLPSSEDEFKTKSINLLYERTVKGTFYGNYKPLSDIPSVVEKYMNKELELEKFITHSIPFSEINKSFDLMLKGESIRAQNVKPVVELHFGLRICGVHKKPPGIFSLEGEGEISCNVSNAERPVCGRRFEISGAGGQDEDADVAGFFLGLWRIELGRFKKVAKMNLGAAKEESTPEVHVPADIDWQKLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVAQSQVPCIKTAFSVISHEGFRALYRGFGTSLMGTIPARAMYMAALEITKSNVGTATVRFGIAEPTAATIANAVAGLSAAMAAQLVWTPVDVVSQRLMVQDGSNARQYANGIDAFRKILRTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCSNKKDDGETTNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGNGRRVPTVVQTVRNLVKEGGWMACYRGLGPRWASMSLSATTMITTYEFLKRLSTKNQDVLT 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00289 800 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Aip08g00289 800 SUPERFAMILY Mitochondrial carrier 483 788 IPR023395 -
Aip08g00289 800 CDD alcohol_DH_plants 10 375 - -
Aip08g00289 800 SUPERFAMILY GroES-like 331 376 IPR011032 -
Aip08g00289 800 PANTHER ALCOHOL DEHYDROGENASE 5 376 - -
Aip08g00289 800 Pfam Mitochondrial carrier protein 585 672 IPR018108 -
Aip08g00289 800 Pfam Mitochondrial carrier protein 703 795 IPR018108 -
Aip08g00289 800 Pfam Mitochondrial carrier protein 499 568 IPR018108 -
Aip08g00289 800 SUPERFAMILY GroES-like 5 188 IPR011032 -
Aip08g00289 800 Pfam Zinc-binding dehydrogenase 208 328 IPR013149 -
Aip08g00289 800 Gene3D Mitochondrial carrier domain 490 798 IPR023395 -
Aip08g00289 800 ProSiteProfiles Solute carrier (Solcar) repeat profile. 583 671 IPR018108 -
Aip08g00289 800 ProSiteProfiles Solute carrier (Solcar) repeat profile. 700 791 IPR018108 -
Aip08g00289 800 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 344 IPR036291 -
Aip08g00289 800 Gene3D - 21 372 - -
Aip08g00289 800 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 376 - -
Aip08g00289 800 Pfam Alcohol dehydrogenase GroES-like domain 37 166 IPR013154 -
Aip08g00289 800 Gene3D - 185 323 - -
Aip08g00289 800 ProSiteProfiles Solute carrier (Solcar) repeat profile. 486 568 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00289 Aip-Chr8 2156966 2170422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00289 461 797 Chloroplast and Mitochondria Gene Families AT1G72820 74.636 7.26e-180 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00289 K18857 - gmx:100801918 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00289 08 2156966 2170422 Aip08g00289 08 2156966 2170422 ECH