Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00287 ATGTATATGAGAGGTAAATGTGGAAATAGAAAAACTGATATCCGGTTTTGGAGAGAAGAAGAAGCAGGGAAGAGAATCGAGAGGTCTTCATCTTCTGCCAAGATGCCAAGAACCCAATTACGCAAAATTGATGGCCTTAGAGAAGTAGAAGATTTCGGAAGGACCGTTCCTTTTGAGTTGACTGTCTATCCTGGAGAGGATGTTGTCGCAAAGCTGTGGAAGGTTTGGGAAGCAAGTACTCACTCTAGCTATGCAATTGCAGCCTTCGGTCATATATCAAAAGCCGCAATTGGCAAACCAAACTCAGATTTGTTTCGTATATATGAAGGAGACTTTGAGATTCTGTCTCTGTCTGGACATTATGTGAATGAAGAGGATGGTTCTGCAGATTGGCGTTTGGGCATCACACTGGCTGATTCTGACAGTGATAGAGAGGCTTTTGGTGGCAGCTCCATCAATACATTGATAGCTTCTGACATTGTATCTGTACGTATTATAAACTTTGAGAAAGAAGAAGAAAAGAGCGATGAAACTGGAACTTCCTCTACAATTGGTGGGGTGCTGATGTCCCTGCTCCTTGCTCTTGAGAAGAAAATAATGGGATTCTTTTCGGATCCGATGGTCAACGAGAGTGATAAGGAAAACTAA 648 0.4228 MYMRGKCGNRKTDIRFWREEEAGKRIERSSSSAKMPRTQLRKIDGLREVEDFGRTVPFELTVYPGEDVVAKLWKVWEASTHSSYAIAAFGHISKAAIGKPNSDLFRIYEGDFEILSLSGHYVNEEDGSADWRLGITLADSDSDREAFGGSSINTLIASDIVSVRIINFEKEEEKSDETGTSSTIGGVLMSLLLALEKKIMGFFSDPMVNESDKEN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00287 215 ProSiteProfiles PPC domain profile profile. 52 190 IPR005175 -
Aip08g00287 215 SUPERFAMILY AF0104/ALDC/Ptd012-like 57 179 - -
Aip08g00287 215 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 177 IPR039605 GO:0003680
Aip08g00287 215 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 7 39 177 - -
Aip08g00287 215 CDD DUF296 57 158 IPR005175 -
Aip08g00287 215 Gene3D - 58 186 - -
Aip08g00287 215 Pfam Plants and Prokaryotes Conserved (PCC) domain 58 169 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00287 Aip-Chr8 2149267 2150913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00287 56 202 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 33.553 2.66e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00287 - - aip:107613024 359.762