Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00285 ATGTTCATTGATGAAGCAGATACTTGTGTGATCTTCGATAATTTTTGCAAGGAAGAGGATATGGCTGCGCATGCTTCTTCTGAGATTATTAAGTATGATGTCTTCCTTAGCTTCAGAGGCACAGACACTCGCTGTAGTTTTCTCAGCCATCTGCGCAAGGCTTTAGAGGACGCGCACGTCAAGACATACGTGGATTACATGCTCAGAGAAGGAACTGAAATATCACACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTCCCAGGATTATGCTTCTTCCAAATGGTGTTTGGAAGAACTAGCCAAAATAATGGAATGCAGCAAACAAAATGGTCAAATTGTAATACCTATTTTCCATAATGTAGACCCATTATGGGTGCGCCACCAAAAGGAAAGTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTCGATTCACAGTCAAGATTCAAGGATGATGCTCACCTTGTTGGTGAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTTTCGTTGTGCACGGAATCTGAAGCTGTTATTATTGGCCTTTGGGGCATGGGCGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAAAAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAGATGCAACTCCCTTTGTCACGCCTGGTGGGATAACTAATTTTGCCAAGAAAAGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACATACACGGTTTGGGGCAAGTAGCAGAATCATAGTGACAACAAGAGATAAGCATGTCCTTCTTAGGGCGGATGCTGATCATATTCATCAAGTTAAGACGTTGAATTCTGATGATTCCCTTCAGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCATTATAAAAGCAGAACAAGTTGAGTTGTCCAAGAGAGTGCTTAACTATTGCAAAGGCCTTCCTTTAGCAATAAAAATCTTGGGTTCCTTCCTTAAAGGAAAAACTCAACAAGAGTGGGAAAGTGAACTGGCCAAACTTGAAAAGATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAATTAGATCGTAATGATCGGAATATATTTTTGGAACTTGCATGTTTCTTTGATAGAAATACAGAAGAAGAGCAGATAAAATCTCTTCTTGATCGCTGTGGATACACAACTACTATCGGCTTGACAAATCTTTGTAATAAAGCTCTTATTTCCATTTCAAACGATTGTGTGTCAATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTCGCGGAGAATGTCTAGATGATCCAGGAAAACGCAGTAGACTATGGCATTCTTATGATACCTATGAAGTACTGAAATACAATAAGGGAACTCAAGCTATTCAAAGTATCACATTAAATATGTCTGAAATTGATATGATAAGGTTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTTCATTCATCCAATTCCAAAAACAAGTTGTGTGCTCCAGAAGGTATTACATCCCTGCCAAAGAAGTTAAGGTATTTTCATTGGGATGGGTTTCCTTTGAAATCTTTGCCGTCTTCTTTTGGTGCTGAGAGATTTGTTGAAATCATAATGCCCAATAGTGGATTGCAAACGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTTGATGGTTCATCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGCGTCAAGTTCCTCCATCTGCTGTGTGTTCCCAGAAGCTGAAATACCTGAAAGTGAGCAACTGTGAGAGCCTTGAATCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCGTAATTGCTCGCAACTGCCGCTCACTACACACTGTATCTTTATCTGCTTTGGATTCTATGGCCAAAGAACCGATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCACCAACTGCAACAAATTGAGAAGGAATTCAAAAAAGAGCATTATGGAACATGCCTATGGCAGACTAAAGCGACCACTAGCAGCAGCACCAACATGTGCTACAACAGCATGGCTGGATAAGGAGGATAAGCACCCGTTTCGTTATCTTTCAGGCAAGCAGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGCCCCGGAATGGTTCAGATATAAAAACCCACAAAGAGGGGCTGTTACTCTTGATGTTGCCCCAGGTGATAACTTGTTGGGTTTCATCTTTTGGATCATTTTTCCTGCATACTATGGGAGTCACGAAGTGCAAGCCACTTCAGTGTCATATAAGTATCGCGTTAAAGTGATGCATGGCCCAAGTTTCAGCTATGACGGGTATTGGTTTCTAGGCGAGAATATATGGCTTAACGATAGCTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAACACCGACACTAATAATAATAATAGCATTCAACTCATGGTTTCATTCCAGTTCTTCTACACTCGTCTTGTTTTGAGTTACCGTTACCCTATTGAGGAAGATGTTAACAAAGAAATAGAAGATTGGGCTGTGCACCCAATATATGCCTCAGACGTTCGAAACTTCAAAGATTGGAGTGTGCATCCAATATATGCCTCAGATGTTCGAAACTGA 2952 0.4065 MFIDEADTCVIFDNFCKEEDMAAHASSEIIKYDVFLSFRGTDTRCSFLSHLRKALEDAHVKTYVDYMLREGTEISHSLLAAIEQSEIALIIFSQDYASSKWCLEELAKIMECSKQNGQIVIPIFHNVDPLWVRHQKESYHHALANHEVRFADRVQIWRDALKEAANLSGFDSQSRFKDDAHLVGEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEAVIIGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLKNVRERAEKYGIDHLKTELLSKLLKEDATPFVTPGGITNFAKKRLSRTKVLVVLDDVNDSDQMEDLCGGHTRFGASSRIIVTTRDKHVLLRADADHIHQVKTLNSDDSLQLFSLNAFKQNCIIKAEQVELSKRVLNYCKGLPLAIKILGSFLKGKTQQEWESELAKLEKMPDEKIQSILRLSYNELDRNDRNIFLELACFFDRNTEEEQIKSLLDRCGYTTTIGLTNLCNKALISISNDCVSMHDLIREMGREIVRGECLDDPGKRSRLWHSYDTYEVLKYNKGTQAIQSITLNMSEIDMIRLHPETFERMPELKLVRFHSSNSKNKLCAPEGITSLPKKLRYFHWDGFPLKSLPSSFGAERFVEIIMPNSGLQTLWEGEQNLVNLRKVDLDGSSSLMELPDLSKASNLREVSISGCKSLRQVPPSAVCSQKLKYLKVSNCESLESIAELPASVVCVIARNCRSLHTVSLSALDSMAKEPIQQQQFEDITFNFTNCNKLRRNSKKSIMEHAYGRLKRPLAAAPTCATTAWLDKEDKHPFRYLSGKQHNHPKLNVLSGAAPEWFRYKNPQRGAVTLDVAPGDNLLGFIFWIIFPAYYGSHEVQATSVSYKYRVKVMHGPSFSYDGYWFLGENIWLNDSYFWYDGQCCIDMIKVMEENTDTNNNNSIQLMVSFQFFYTRLVLSYRYPIEEDVNKEIEDWAVHPIYASDVRNFKDWSVHPIYASDVRN 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00285 983 SMART till_3 31 167 IPR000157 GO:0007165
Aip08g00285 983 Pfam TIR domain 31 207 IPR000157 GO:0007165
Aip08g00285 983 ProSiteProfiles TIR domain profile. 30 194 IPR000157 GO:0007165
Aip08g00285 983 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 729 IPR044974 GO:0006952
Aip08g00285 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 454 IPR027417 -
Aip08g00285 983 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 729 - -
Aip08g00285 983 SUPERFAMILY L domain-like 513 730 - -
Aip08g00285 983 Gene3D - 360 445 IPR042197 -
Aip08g00285 983 Gene3D Ribonuclease Inhibitor 537 759 IPR032675 -
Aip08g00285 983 Pfam NB-ARC domain 213 445 IPR002182 GO:0043531
Aip08g00285 983 PRINTS Disease resistance protein signature 226 241 - -
Aip08g00285 983 PRINTS Disease resistance protein signature 302 316 - -
Aip08g00285 983 PRINTS Disease resistance protein signature 396 410 - -
Aip08g00285 983 PRINTS Disease resistance protein signature 639 655 - -
Aip08g00285 983 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 170 IPR035897 -
Aip08g00285 983 Gene3D - 29 191 IPR035897 -
Aip08g00285 983 Gene3D - 192 357 IPR027417 -
Aip08g00285 983 Pfam Leucine Rich Repeat 622 639 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00285 Aip-Chr8 2128340 2139438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00285 32 738 WRKY Transcription Factor Family AT4G12020 30.844 2.80e-90 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00285 - - adu:107461399 1872.06