Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00284 ATGGCTTCGTCGTCTTCTCTGTCCGTTGCTTCTGAAAGCAAATATGATATCTTCCTTAGCTTCAGAGGCATAGATACCAGACGTGGTTTTCTCAGCCATCTGATTAAGGCTTTAAACCAAAAACAGATTGAGATCTATGTAGACTATAAGCTCAGAGAAGGAACCCAAATATCACACTCACTCCTTACTgccattgaagaatcagagatttccttgattatattctcccaagattatgcttcatccaagtggtgcttggatgaactcgtcaaaataatgaagtgcaggaaagagaaaggtcaaacagcaatacctatattttatgatgtagatccatcttgtgtacgacatcaaaggggaagttatgTCGATGCACTTTCCGGCCATCGGAAAACGTCATCGGCGGGGCAGTTGCTAATATGGAAAGAAGCTCTCAACGAGGCTGCCAATTTGTCTGGACTGCATTCATCCAACTTTGGGAGTGATGCTGCTCTTATTGACGAAATTGTCAAACGCGTGTTACAAAGGTTGAATGAAAAGTGCCAAGGAGATTTACAAGGACTTGTTGGAATGTATGAACCAATTACAGAGCTAGAATCATTATTGTGCAAGGAATCAAAAGCTGTAGTTATTATTGGACTTTGGGGCATGGGTGGTATTGGAAAGACAACTCTTGCTAGTGTTGTTTTCGATAGGGTATGTCATGAATTTGAAGGACTCTGCTTCTTAGATAATGTAAGAGAAAAAGTCCAGAAATATGGCATAAATCATTTGAAGAAAGAACTTGTATCTAAGCTGCTGGACATTAAAGATGTAGAAAAAGATGTAGTCTCTTTCATCATGCCTATTGGGATAACTGATTTTGCCAAGAGAAGACTCCGTCGCAGAAAAGTTCTTCTTGTTCTTGATGATGTGAGTGATTCTAAGCAACTGGAAGATTTATGTGGAGGACATGATTGGTTTGGGCTAACTAGTAGGATCATGGTGACAACTAGAGATAAACATGTGCTGAATAGAGCCGATCATATTCATGAGGTTAAGGCATTAAATCAGGATGAGTCTCTTGAGCTTTTTAAGTTGAATGCCATGAAACAAAACTACATGGACACAGAGCAAGTTGAGCTATCCATGAGGGTTCTTAACTATGCGAAAGGAATTCCATTAGCCTTAAAAGTTATGGGTTCCTTTCTCTGTGGAAAAAGTAAGCAGGAGTGGAAAAGTCAGCTTCTTAAACTTGAAAAAATGCCTCATGTAGAAATTCAAAATATATTGAGATTGAGCTATAACGAACTAGATCGTCATGATCGGAATATTTTTCTATACCTTGCATGTTTCTTCAAGACAGTTTCAGAAGAGCAGGTTACGTTTCTTCTTGATGCATGCGGATACTCAACAGCTATTGGGTTAAAAACTCTTCAAGACAAAGCTCTTATTTCCATTTTAAGCTGTGAAGTGACAATGCACGACTTGCTTCGAGAAATGGGACGTGAAGTAGTTCGGGAAGAGTCTCCCAATGATCCGGGAAAGCGCAGTAGATTATGGGATTCTACTGATATCTATAAAGTATTGAAATATGACACGGGAACTGAAACTATTGAAAGCATAACATTAGACATGTCAAAAATTGACGTGCTAAGCTTGCATCCTCAGATATTTGCAAGAATGTACAAGCTCAAGTTTTTAAATGTTCATTCATGGGATGGTGAGCATAGGCTCTGTGCTCCTCATGGTATTGAATCCTTGTCAGATGAGCTGAGATTTTTTCAATGGGAAGACTACCCTTCGAAATCTTTACCATTGTCTTTTTGTGCGGAAAATCTTGTGGAAATTATAATGCCTTCTAGTCAGTTGGAGAAGCTTTGGGAAGGTGTCCAGAATCTTGTAAATCTGAAGCTAGTAGATCTTAATTATTCATCACACCTAGTCGAGCTCCCAGATTTCTCCAAGGCCCCAAATCTTGAAGAAGTAAATGTTTCCACCTGCAAGAGTCTGCAGCAAGTTCCCCAATCTGTTTTGTCTTCTCAAAAGCTGGGTTATCTCTTTCTAAATGATTGTAATGAACTAAGAAGTTTCCAGCACAACATTCATCATCAATCCCTTAAGACACTCTCTTTCCATAGCTGCATTGGTCTCAGAGAGTTCTCTTTGACACAGCTTAACCACGGCACAGACAAATTGGTGTTATCAGCTCCGCTTGAACGGCTAAAACTGGATTACTGTTCCAACCTTTCTCTGCTGCCAGACAATATAAGCATGCTTTCATCATTGAAGGACTTATCAATGAGTCACAGCAGTGTGAGAAGCTTGCCTGAAAGCATTAAGCATCTGTCACGGCTGAAATACCTCAACTTGAGTAATTGCAAGAGGCTTCAATCAATACCAGAGCTTCCATCGTCCATTTTGGGGTTAATTGCTGTTAACTGCACATCATTACATACTGTTTTCATGGCTGAACCAATCAAAGAAGAGAAATTCGGATATAAAACATTTGCATTTACCAATTGTGTTAAGTTGGAGAAGGCTACAATCCAGGCCATTATGGCAAACGCCTATGTCAGAATACAGCAAGCAGCAAACGCATGGCTACCAACAGGACAGAGGAATGAGTACTATTATGCAACCTTTGATAATAACTATGAACTCAGGGTTCATGTTTGCTTACCAGGAAGCCAAGTTCCAGGATGGTTCAGCTATAGAACAACCGAAACTTGCATGACTGTTGAACTTGTCCTACTTGCTTCTAGTATCAGTAGGTTCCGAGGTTTCATCTTCTGTGCTGTTCTTCCTCCTAGAGAGGAAAAAGGCTTAGGCTCGGCAATTTTGAGATGTTCTTACTTCATTGAAACGAGTGATGGTCCAAGCTTGGGCAGTCACAGTTCGTGGGTGATATATGACCGTACAGTTGATAAGGAATCCGACAATGTGTATATGTGGTATGATAGGCAATGCTGCATTGATATGATGAGGAGAACCAAACAAGGCAAAGGAAGTGATGAAGATAATGTTCATAAGTACAAGGTTTTATTTGAATTCCATTACTCCCTTAATTCCACAGGAATAAAAGAGTGTGGTGTCCATCCAATATATGTCTCGGATACTAAATCCAAGAGAAGACCAGAGATAACTCAAGTTGATGAGAACCAAGGTGATCTAGAGCTGCAAGAACCACTTTCTTCCACAAATAAGAACTTTAAAATGGAATACTTTTCTTCAAGGGAGTTTTCTGCTACACAGCTCAGCAGCAAGGATGATCAAGGGCAGAATGGGAAAATTACTCCTTTTCAATTCATGTATAGGAGGAGAGCGAAGAAGAAAATAAAGGAATGA 3327 0.3778 MASSSSLSVASESKYDIFLSFRGIDTRRGFLSHLIKALNQKQIEIYVDYKLREGTQISHSLLTAIEESEISLIIFSQDYASSKWCLDELVKIMKCRKEKGQTAIPIFYDVDPSCVRHQRGSYVDALSGHRKTSSAGQLLIWKEALNEAANLSGLHSSNFGSDAALIDEIVKRVLQRLNEKCQGDLQGLVGMYEPITELESLLCKESKAVVIIGLWGMGGIGKTTLASVVFDRVCHEFEGLCFLDNVREKVQKYGINHLKKELVSKLLDIKDVEKDVVSFIMPIGITDFAKRRLRRRKVLLVLDDVSDSKQLEDLCGGHDWFGLTSRIMVTTRDKHVLNRADHIHEVKALNQDESLELFKLNAMKQNYMDTEQVELSMRVLNYAKGIPLALKVMGSFLCGKSKQEWKSQLLKLEKMPHVEIQNILRLSYNELDRHDRNIFLYLACFFKTVSEEQVTFLLDACGYSTAIGLKTLQDKALISILSCEVTMHDLLREMGREVVREESPNDPGKRSRLWDSTDIYKVLKYDTGTETIESITLDMSKIDVLSLHPQIFARMYKLKFLNVHSWDGEHRLCAPHGIESLSDELRFFQWEDYPSKSLPLSFCAENLVEIIMPSSQLEKLWEGVQNLVNLKLVDLNYSSHLVELPDFSKAPNLEEVNVSTCKSLQQVPQSVLSSQKLGYLFLNDCNELRSFQHNIHHQSLKTLSFHSCIGLREFSLTQLNHGTDKLVLSAPLERLKLDYCSNLSLLPDNISMLSSLKDLSMSHSSVRSLPESIKHLSRLKYLNLSNCKRLQSIPELPSSILGLIAVNCTSLHTVFMAEPIKEEKFGYKTFAFTNCVKLEKATIQAIMANAYVRIQQAANAWLPTGQRNEYYYATFDNNYELRVHVCLPGSQVPGWFSYRTTETCMTVELVLLASSISRFRGFIFCAVLPPREEKGLGSAILRCSYFIETSDGPSLGSHSSWVIYDRTVDKESDNVYMWYDRQCCIDMMRRTKQGKGSDEDNVHKYKVLFEFHYSLNSTGIKECGVHPIYVSDTKSKRRPEITQVDENQGDLELQEPLSSTNKNFKMEYFSSREFSATQLSSKDDQGQNGKITPFQFMYRRRAKKKIKE 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00284 1108 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
Aip08g00284 1108 Gene3D - 348 432 IPR042197 -
Aip08g00284 1108 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 745 981 - -
Aip08g00284 1108 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 750 - -
Aip08g00284 1108 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 153 IPR035897 -
Aip08g00284 1108 Coils Coil 255 275 - -
Aip08g00284 1108 Gene3D - 11 173 IPR035897 -
Aip08g00284 1108 Gene3D Ribonuclease Inhibitor 526 724 IPR032675 -
Aip08g00284 1108 ProSiteProfiles TIR domain profile. 13 177 IPR000157 GO:0007165
Aip08g00284 1108 Gene3D - 174 347 IPR027417 -
Aip08g00284 1108 Pfam C-JID domain 887 1033 IPR045344 -
Aip08g00284 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Aip08g00284 1108 Pfam TIR domain 14 182 IPR000157 GO:0007165
Aip08g00284 1108 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Aip08g00284 1108 PRINTS Disease resistance protein signature 211 226 - -
Aip08g00284 1108 PRINTS Disease resistance protein signature 292 306 - -
Aip08g00284 1108 PRINTS Disease resistance protein signature 383 397 - -
Aip08g00284 1108 PRINTS Disease resistance protein signature 774 790 - -
Aip08g00284 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 750 IPR044974 GO:0006952
Aip08g00284 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 745 981 IPR044974 GO:0006952
Aip08g00284 1108 SMART till_3 14 151 IPR000157 GO:0007165
Aip08g00284 1108 SUPERFAMILY L domain-like 500 818 - -
Aip08g00284 1108 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Aip08g00284 1108 Gene3D Ribonuclease Inhibitor 725 859 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00284 Aip-Chr8 2123520 2127744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00284 10 807 WRKY Transcription Factor Family AT4G12020 31.280 2.27e-103 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00284 - - aip:107613764 2164.42