Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00283 ATGGCTGCGCATGCTTCTTCTGAGATTAATAAGTATGATGTCTTCCTCAGCTTCAGAGGCACAGACACTCGCCGTGGTTTTCTCAGCCATCTGCACAAGGCTTTAGAGGACAAGCACATCAAGACATACGTGGATTACATGCTCAGAGAAGGAACTGAAATATCACACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTCCCAGGATTATGCTTCTTCCAAATGGTGTTTGGAAGAACTAGCCAAAATAATGGAATGCAGCAAACAAAATGGTCAAATTGTAATACCTATTTTCCATAATGTAGACCCATCATGGGTGCGCCACCAAAAGGAAAGTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTTCATTCACCCTCATCAAGCTTCAGGAATGATGCTCACCTTGTTGATGAAATCGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTATCGTTGTGCACGGAATCTGAAGCTGTTATTATTGGCCTTTGGGGCATGGGCGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATCTGGTATAGATAATTTGAAGAAAGAACTTCTTTCCAAGCTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCACGCCTGGTGGGATAACTAATTTTGCCAAGAAAAGACTTGGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGATCAAATTGAAGATTTATGTGGAGGACATACATGGTTTGGGGCAAGTAGCAGAATCATAGTGACAACAAGAGACAAGCATGTCCTTGTTAAGGCGGATGCTGATCATATACATGAAGTTGAGACATTGAATTCTGATGATTCTCTTCGGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCACTATAGAAGCAGAACAAGTTGAGTTGTCTAAGAGAGTGCTTAACTATTGCAAAGGCCTCCCTTTAGCATTGAAAATCTTGGGTTCATTTCTTAAAGGAAAAACTCAACGAGAGTGGGAAAGTGAACTGCTCAAACTTGAAAAGATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAACTGGATCGTAATGATCGGAATATATTTTTGCATCTTGCATGTTTCTTTTATACAAATTCAGAAGAAGAGCTGATACAATCTGTTCTTGATTCCTGCGGATACGCAACAACTATCGGGTTGACAAATCTTGGTAATAAAGCTCTTATTTCCATTTCAAATGGTTGTGTGTCAATGCATGACTTAATTCGAGAAATGGGTCGTGAAATTGTTCGCGAAGAATCTCCAAATGATCCAGGAAAACGCAGTAGACTGTGGGATCCTCAGGATATCTGTAAAGTATTGAAAGACAATAAGGGAACGGATGCTATTGAAAGTATCGAATTGAACATGTCGGAAATTGACTGGATGAGCTTGCACCCTGAGACATTTGAAAGAATGGCTGGACTGAAGCTTGTTAGATTTCATGCAGCCGATTCCAAAAACAAGTTGTATGCTCCAGAGGGTATTAGATCTATGTCGAACGAGTTAAGGTATTTTCATTGGGATGAGTTTCCTTTGAAATCTTTGCCACCTTCTTTAAGTGTTGAGAAAATTGTTGAAATCATAATGCCCAACAGTGGATTGCAAACGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTAGATGGTTCGTCAAGCCTAATGGAGCTCCCAGGTTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGCGTCAAGTTCCTCCATCTGCTGTATGTTCCCAGAAGCTGAAATACCTGAACGTGAGCAACTGTGAGAGCATTGAGTCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCGTAATTGCTCGCGACTGCCGCTCCCTACACACTGTATCTGTATCTGCTTTGGATTCTGTGGCTGAAGAGCCAATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCACCAACTGCCACAAATTGGAAGGGAATGCAAAAAACAGCATTATGGAACATGCCTATGGAAGATTAAAGCGACCATTAGCAGCAGCACCTACATCTGCTACGACAGCATGGCAGGACAAGGAGGATAAGGATAAGTTTCTTTCTCTGTGGAACGACAAGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGGCTCGGGATGGTTCAGATATATAAACCCACAGAACGGGGCCGTCACTCTTGATGTTGCCCCAGGTGATAGCTTGTTGGGTTTCATCTTTTGGGTCGTTTTTCCTGCATACTATGGGAGTTACCAAGTGAGCGCCACTTCAGTGTCATATACGTATTGTGTTGAAGTGAGGAATGGTCCAAGTTTCAGTTATGATGGGCATTGGATGCCAGGCGAGGATATATGGCTTGACGATAGCTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAACACCAACACTAATAATAACAATATTCAACTCAAGGTTTCATTCAAGTTCTTCTACAATCGTCTTATTTTGAGTCAGCCTATTGAGGAAGATGATGACCAAGAAGTAGAATATTGGAGTGTACACCCAATATATGCCTCAGATGTTCGTGGTGGCATGAGCATGGATGTACCGTCTATTGAGGAAGGTAATGGTGGTTCCATAGATGACTCAGATGAAGACGACGAAGGTAGTGAAAGAGGTGGTGTTTCGGAGTCGGTTGCACTCGTGCATGGTGGCAGGACGGATCTATAG 2979 0.4199 MAAHASSEINKYDVFLSFRGTDTRRGFLSHLHKALEDKHIKTYVDYMLREGTEISHSLLAAIEQSEIALIIFSQDYASSKWCLEELAKIMECSKQNGQIVIPIFHNVDPSWVRHQKESYHHALANHEVRFADRVQIWRDALKEAANLSGFHSPSSSFRNDAHLVDEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEAVIIGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLNNVRERAEKSGIDNLKKELLSKLLKEEDASPFVTPGGITNFAKKRLGRTKVLVVLDDVNDSDQIEDLCGGHTWFGASSRIIVTTRDKHVLVKADADHIHEVETLNSDDSLRLFSLNAFKQNCTIEAEQVELSKRVLNYCKGLPLALKILGSFLKGKTQREWESELLKLEKMPDEKIQSILRLSYNELDRNDRNIFLHLACFFYTNSEEELIQSVLDSCGYATTIGLTNLGNKALISISNGCVSMHDLIREMGREIVREESPNDPGKRSRLWDPQDICKVLKDNKGTDAIESIELNMSEIDWMSLHPETFERMAGLKLVRFHAADSKNKLYAPEGIRSMSNELRYFHWDEFPLKSLPPSLSVEKIVEIIMPNSGLQTLWEGEQNLVNLRKVDLDGSSSLMELPGLSKASNLREVSISGCKSLRQVPPSAVCSQKLKYLNVSNCESIESIAELPASVVCVIARDCRSLHTVSVSALDSVAEEPIQQQQFEDITFNFTNCHKLEGNAKNSIMEHAYGRLKRPLAAAPTSATTAWQDKEDKDKFLSLWNDKHNHPKLNVLSGAGSGWFRYINPQNGAVTLDVAPGDSLLGFIFWVVFPAYYGSYQVSATSVSYTYCVEVRNGPSFSYDGHWMPGEDIWLDDSYFWYDGQCCIDMIKVMEENTNTNNNNIQLKVSFKFFYNRLILSQPIEEDDDQEVEYWSVHPIYASDVRGGMSMDVPSIEEGNGGSIDDSDEDDEGSERGGVSESVALVHGGRTDL 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00283 992 SMART till_3 11 147 IPR000157 GO:0007165
Aip08g00283 992 SUPERFAMILY "Winged helix" DNA-binding domain 414 520 IPR036390 -
Aip08g00283 992 PRINTS Disease resistance protein signature 207 222 - -
Aip08g00283 992 PRINTS Disease resistance protein signature 284 298 - -
Aip08g00283 992 PRINTS Disease resistance protein signature 378 392 - -
Aip08g00283 992 PRINTS Disease resistance protein signature 621 637 - -
Aip08g00283 992 Gene3D - 6 180 IPR035897 -
Aip08g00283 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
Aip08g00283 992 SUPERFAMILY L domain-like 496 691 - -
Aip08g00283 992 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 150 IPR035897 -
Aip08g00283 992 Gene3D - 189 338 IPR027417 -
Aip08g00283 992 Pfam Leucine Rich Repeat 604 621 IPR011713 -
Aip08g00283 992 Gene3D - 342 427 IPR042197 -
Aip08g00283 992 ProSiteProfiles TIR domain profile. 10 175 IPR000157 GO:0007165
Aip08g00283 992 Gene3D Ribonuclease Inhibitor 518 728 IPR032675 -
Aip08g00283 992 MobiDBLite consensus disorder prediction 950 992 - -
Aip08g00283 992 Pfam NB-ARC domain 194 427 IPR002182 GO:0043531
Aip08g00283 992 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 711 - -
Aip08g00283 992 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 711 IPR044974 GO:0006952
Aip08g00283 992 Pfam TIR domain 11 188 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00283 Aip-Chr8 2119308 2122616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00283 12 748 WRKY Transcription Factor Family AT4G12020 29.827 8.05e-92 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00283 - - adu:107461399 1560.81