Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00281 ATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAATTAGATCGTAATGATCGGAATATATTTTTGGAACTTGCATGTTTCTTTGATACAAATACAGAAAAAGAGCAGATAAAATCTCTTCTTGATCGCTGTGGATACACAACTACTATTGGATTGACAAATCTTTGTAATAAAGCTCTTATTTCCATTTCCAACGATTGTGTGTCAATGCATGACTTAATTCAAGAAATAGGCCGTGAAATTGTTCGCGAAGAATGTCTAAATGATCCAGGAAAACGCAGTAGACTATGGGATTCTTGTGATACCTATGAAGTACTGAAATACAATAAGGGAACTCAAGCTATTGAAAGTATCACATTAAACATGTCTGAAATTGATACGATAAGGTTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTCCATGCACCCAATTTCAGAAACAAGTTGTGTGCTCCAGAAGGTATTACATCCCTGCCAAAGAAGTTAAGCTACTTTCATTGGGATGAGTTTTCTTTGAAATCTTTGCCGTCTTCTTTTGGTGTTGAGAGAATTGTTGAAATCATAATGCCCAATAGTGGATTGCAAACGCTTTGGGAAGGTGAACAGAAGCTGAAATACCTGAAAGTGAGCAACTGTGAGAGCCTTGAATCCATAGCAGAGCTTCCAGCATCGGTTGTGTATGTAATTGCTCGCAACTGCCGCTCGCTACACACTGTATCTGTATCTGCTTTGGATTGTGTGGCCAAAGAACCGATCCGGCAGCAGCAATTTGAGGATATAACCTTCAATTTCAGCAACTGCGACAAATTGAGAAGGAATTCAAAAAAGAGTATTATGGAACATGCCTATGGCAGACTAAAGCGACCACTAGCAGCAGCACCTACATGTGCTACAACAGCATGGCTGGATAAGGAGGATAAGCACCCGTTTCGTTATCTGTCAGGCAAGCGGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGCCCCGGAATGGTTCAGACATATAAACCCACAAAGAGGGGACGTTACTCTTGATGTTGCCCCAGGTGATAGCTTGTTGGGTTTCATCTTTTGGATCATTTTTCCTGCATACTATGGGAGTCACGAAGTGCAAGCCACTTCAGTGTCATATAAGTATTGCGTTAAAGTGATTCATGGCCCAAGTTTCAGTTATGACGGGTATTGGTTTCTAGGCGAGAATATATGGCTTAACGACAGCTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGGAATGGAAGAAAACACCAACACTAATAATAGCATTCAACTCGTGGTTTCATTCCAGTTCTTCTATGATCGTCTTGTTTTGTTTCACCATTACCCTATTGAGGAAGATGTTGGCAAAGAATTAGAAGATTGGGGTGTGCACCCAATATATGCCTCAGATGTTCGAAACTGA 1467 0.4049 MPDEKIQSILRLSYNELDRNDRNIFLELACFFDTNTEKEQIKSLLDRCGYTTTIGLTNLCNKALISISNDCVSMHDLIQEIGREIVREECLNDPGKRSRLWDSCDTYEVLKYNKGTQAIESITLNMSEIDTIRLHPETFERMPELKLVRFHAPNFRNKLCAPEGITSLPKKLSYFHWDEFSLKSLPSSFGVERIVEIIMPNSGLQTLWEGEQKLKYLKVSNCESLESIAELPASVVYVIARNCRSLHTVSVSALDCVAKEPIRQQQFEDITFNFSNCDKLRRNSKKSIMEHAYGRLKRPLAAAPTCATTAWLDKEDKHPFRYLSGKRHNHPKLNVLSGAAPEWFRHINPQRGDVTLDVAPGDSLLGFIFWIIFPAYYGSHEVQATSVSYKYCVKVIHGPSFSYDGYWFLGENIWLNDSYFWYDGQCCIDMIKGMEENTNTNNSIQLVVSFQFFYDRLVLFHHYPIEEDVGKELEDWGVHPIYASDVRN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00281 488 Pfam Leucine Rich Repeat 195 212 IPR011713 -
Aip08g00281 488 Gene3D Ribonuclease Inhibitor 104 288 IPR032675 -
Aip08g00281 488 Gene3D - 9 84 IPR036388 -
Aip08g00281 488 SUPERFAMILY L domain-like 89 232 - -
Aip08g00281 488 SUPERFAMILY "Winged helix" DNA-binding domain 5 111 IPR036390 -
Aip08g00281 488 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 3 249 - -
Aip08g00281 488 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 249 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00281 Aip-Chr8 2113582 2115422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00281 6 235 WRKY Transcription Factor Family AT4G12020 36.475 1.07e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00281 - - adu:107461399 884.404