Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00279 ATGGGTCGTGAAATTGTTCGCAAAGAATGTCAAGATGATCCAGGAAAACGCAGTAGACTATGGGATTCTTGTGATACCTATGAAGTACTAAAATACAATAAGGGAACTCAAGCTATTCAAAGTATCACTTTAAACATGTATGAAATTGATACGATAAGGTTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTTCATGCACCCGGTTTCAGAACAAAGTTGTGTGCTCCAGAAGGTATTACATCCCTGCCAAAGAAGTTAAGCTATCTTCATTGGGACGAGTTTCCTTTGAAATCTTTGCCGTCTTCTTTTGGTGCTGAGAGATTTGTTGAAATCATAATGCCCAACAGTGGATTGCAAACGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTAGATGGTTCGTCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTCCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGCGTCAAGTTCCTCCATCTGCTGTATGTTCCCAGAAGCTGAAATACCTGAACGTGAGCAACTGTGAGAGCCTTGAGTCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCATAATTGCTCGCAACTGCTGCTCACTACACACTGTATTTGTATCTGCTTTGGATTCTGTGGCTGAAGAGCCAATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCACCAACTGCTACAAATTGGAAGGGAATGCAAGAAACAACATTACGGAACATGCCTATGGCAGACTAAAGCGACCACTAGCAGTAGCACCTACATGTGCTACAACACCATGGCAGTATACGGGTAAGTTTCTTCCTCTGTGGAACGACAGGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGACCCGGGATGGTTCAGATATATAAACCCAGAAAGAGGGGCCGTTACTCTAGATGTTGCCTCAGGTGATAACTTGTTGGGATTCATCTTTTGGGTCATGTTTCCTGCATACTATGGGAGTTACCAAGTGGACGCCACTGAAGTGTCATATAAGTATTGCGTTAAAGTGATGCATGGCCCAAGTTTCAGCTATGACGGGTATTGGATGCCAGGCGAGAATATATGGCATAACGGTAACTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAGCACCAACACTAATAACAGTATTCAACTCGTGGTTTCATTCCAGTTCTTCTATGATCGTCTTATTTTGGGTCAGCCTATTGTGGAAGATGATGGCAAAGAATTAGAATATTGGGGTGTGCACCCAATACTCAAAACCCACCAACCCCCCAGGCCCAGGCCCACCCACTTCCCTATCAAGGCCCAATCCCAGCCCACCACTCCTCTCACCTCCCCCAAGCAGCGCCGCCCTGCCGACGAGAACATCCGCGACGAAGCCCGTCGCAACAACATCACCCACGACAACCTCTTCTCAGCCTGCTACGTCCCCTTCAACGCCGACCCTTCCTCCACCGAGTCCTACTCCCTCGATGAGATCGTTTACCGCTCTCAATCCGGCGGCCTCCTCGACGTCCAGCACGACATGGCCGCCCTCAAGAAGTTCGACGGCGAGTACTGGCGCAACCTCTTCGATTCCCGCGTCGGCCGCACCACCTGGCCCTACGGCTCCGGCGTCTGGTCCAAGAAGGAGTGGGTGCTCCCCGAGATCGACAGCGATGACATCGTCAGTGCCTTTGAGGGAAACTCCAATCTCTTCTGGGCCGAGCGTTTCGGCAAACAGTTCCTCGGCATGAACGATCTCTGGGTCAAGCACTGCGGCATCAGCCACACCGGCAGCTTCAAGGATCTCGGCATGACCGTTCTCGTCAGCCAGGTGAACCGCTTGAGGAAGATGAATAGACCTGTGGTTGGTGTTGGTTGTGCTTCAACTGGAGACACCTCTGCTGCTTTGTCTGCTTACTGCGCTTCTGCGGGGATCCCTTCCATTGTGTTCTTGCCTGCTAACAGGATCTCCATTGCGCAGTTGGTGCAGCCGATTGCGAATGGTGCTTTCGTGCTGAGTATTGACACCGATTTTGATGGTTGTATGCAGCTGATTAGGGAGGTTACGGCCGAGCTGCCGATATATTTGGCGAATTCTTTGAACAGTTTGAGGCTTGAGGGGCAGAAGACTGCTGCTATTGAGATTCTGCAGCAGTTTGATTGGCAGGTCCCTGATTGGGTCATTGTCCCCGGCGGCAACCTTGGCAATATTTATGCTTTTTACAAAGGGTTTCATATGTGTAAAGAGTTGGGGCTTGTGGATAAGATTCCCAGGCTCGTTTGTGCCCAGGCTGCGAATGCCAATCCTTTGTACTTGTACTTCAAGTCAGGGTGGAAAGATTTTAAGGCGGTGAAGGCTAATACTACCTTTGCATCTGCCATACAAATTGGTGACCCTGTTTCAATTGACAGGGCTGTTTATGCCTTGAAGAACTCGAATGGGATTGTTGAGGAGGCGACTGAGGAGGAGTTGATGGATGCCATGGCTCAAGCAGACTCCACTGGCATGTTTATTTGCCCTCACACTGGAGTGGCTTTGACTGCATTGTTTAAGTTGAGGAATAGTGGGGTTATAAAGCCTACCGATAGGACTGTGGTGGTGAGCACGGCTCATGGGTTGAAGTTCACTCAGTCCAAAATCGATTATCATTCCAAGGATATCAAGGAGATGGCTTGCAGATATGCTAACCCGCCGGTGCAAGTGAAGGCGGACTTTGGCTCGGTTATGGATGTGTTGAAGAAGTATTTGCTGAGTAAGGCTCCAAAGCATTAG 2844 0.4835 MGREIVRKECQDDPGKRSRLWDSCDTYEVLKYNKGTQAIQSITLNMYEIDTIRLHPETFERMPELKLVRFHAPGFRTKLCAPEGITSLPKKLSYLHWDEFPLKSLPSSFGAERFVEIIMPNSGLQTLWEGEQNLVNLRKVDLDGSSSLMELPDLSKAPNLREVSISGCKSLRQVPPSAVCSQKLKYLNVSNCESLESIAELPASVVCIIARNCCSLHTVFVSALDSVAEEPIQQQQFEDITFNFTNCYKLEGNARNNITEHAYGRLKRPLAVAPTCATTPWQYTGKFLPLWNDRHNHPKLNVLSGADPGWFRYINPERGAVTLDVASGDNLLGFIFWVMFPAYYGSYQVDATEVSYKYCVKVMHGPSFSYDGYWMPGENIWHNGNYFWYDGQCCIDMIKVMEESTNTNNSIQLVVSFQFFYDRLILGQPIVEDDGKELEYWGVHPILKTHQPPRPRPTHFPIKAQSQPTTPLTSPKQRRPADENIRDEARRNNITHDNLFSACYVPFNADPSSTESYSLDEIVYRSQSGGLLDVQHDMAALKKFDGEYWRNLFDSRVGRTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDKIPRLVCAQAANANPLYLYFKSGWKDFKAVKANTTFASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDYHSKDIKEMACRYANPPVQVKADFGSVMDVLKKYLLSKAPKH 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00279 947 Pfam Leucine Rich Repeat 115 132 IPR011713 -
Aip08g00279 947 CDD Thr-synth_1 569 899 - -
Aip08g00279 947 Gene3D Ribonuclease Inhibitor 30 231 IPR032675 -
Aip08g00279 947 SUPERFAMILY L domain-like 44 203 - -
Aip08g00279 947 TIGRFAM thrC: threonine synthase 574 898 IPR004450 -
Aip08g00279 947 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 485 939 IPR036052 -
Aip08g00279 947 Pfam Pyridoxal-phosphate dependent enzyme 587 893 IPR001926 -
Aip08g00279 947 MobiDBLite consensus disorder prediction 462 477 - -
Aip08g00279 947 PANTHER THREONINE SYNTHASE, CHLOROPLASTIC-LIKE ISOFORM X1 463 944 - -
Aip08g00279 947 Gene3D - 701 945 IPR036052 -
Aip08g00279 947 PANTHER CYSTATHIONINE BETA-SYNTHASE 463 944 - -
Aip08g00279 947 MobiDBLite consensus disorder prediction 451 484 - -
Aip08g00279 947 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 614 628 IPR000634 GO:0006520|GO:0030170
Aip08g00279 947 Gene3D - 479 700 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00279 Aip-Chr8 2088548 2093741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00279 116 210 WRKY Transcription Factor Family AT4G12020 33.333 5.80e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00279 K01733 - jre:109002004 905.205