Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00265 ATGGATCCTCACAAAGAGAGAATTAAGACTGGATGCCACAAAATCCTGGACGGAATAAACTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTCCATTCCTTGGTAATGATGAGAGAAATTGCACGCGGTGTTGTTGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGATTCGTGCCTTGCGCCGCAGCATCTTGAAAATGGTGTGTGCATCGAGGGATATCATTCGATTATTGAGTAGGATGTCTTACGAAGGCTTGGATGACCAACAGATGAATTTAGTGTTGAGAATGAAAGAAATTGCTCATCGGATTATTGATAAACAGCCTAGAGTTGCAATAACCAGGCCTAATTTACTTGTAGAACAAGTTGCACTTTTGGATGAAGGGATGAGAGATAGTCCTGTTGTTGAGTCGAGTAAGATCGGGGATGCTCTGATTGATGGGGATCAAAGCATGAGTAATGATGATGATATGTTAGATGTGGAACATGTTTTAAGATTTGAAAATGGGATGAATGTTGCACAGGAGTCTCTATCGCCATCATGCTTCCAGCAATTTCTTCTGTGGCCTCCTGACGATTGCATCACTTTAGAATGGGTTCAAGATATGATGTCCACATTTGAGCACGTTTCACAGAAGGTGTTGCCATCTGCATTTTGTAATATTGTGCCAACCATTTTGGTGGATAAGTTGACAGATGCTGCTTCCAGTATTTTATGTGAGGAACCAAATTGTGTGGAGGTTGACTGTGAAGGAGAAGATTCAAGGGTCATCGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCTCTTTTCAAGCATGCAGGAGTGCCCTCGGAGAGCCAATTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGAGCTTGGGGCATTGAAGTACTTTTGGTCTTGCTAGCTTGGAAGGTGTTGATGCCTCACAGAATATATCTGCTCTGTGGAAATCATGAATCAAGATATTACACTGGAAGGTATGGTTTTGAGAACGAAGTATGGACCAAATATGGTAAACAAGGAGAATATGTATACAACAAATTTTTGGAGTGCTTCAAGGTGCTTCCGTTAGCTTCAGTTATAGCAAACTGTGTTTATACTACTCATGGAGGGTTTTTCCGTAGCAAACATTCTGCTCCTTCACGAAAGCCAAAACATAGGAAGACACAAAGGGTGGATCTTGGTTCTTTGGCTGAGTTATCTGAAGTTAAAAGAGCTCGTATTGGTTCCCCTTATGAAGGTCCTAATATATTATTGACTGACATCCTCTGGTCAAAACCATCTAAAAGGAATGGTCTAAGGGAGAATGCAGGTCGAAAGTATGGTTTATGGTGGGGTCCTGATTGCACTGAGGCTTTCTTAAAACGACACAATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTGGGAACATGATGATTGGATATAGCTTGGATCACGATGTAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCAGACTACCCACAGTTTGGTCAAAAGAGATATAATAATGAAGGAGCATATGCAATATTGCAGTCTCCAGATTTTGCAAGTCCTTCCTTTTTCTCATTCAAAGCTGCAGAAAGACCAACGGTGGATCCTTATGTTGATTCTGATGCTGATGAGATGGACTTGCGTGCGCCAAGTTCTTCCCAAATAGCCTCAACCTCTGCCTTCTGTGCTTCTCAAAGACCATATCCAGGTGGCTCGAGACCCATTTTTGATTTTAGTTTGTTGGGCATACACAATGGACCATCTTGGAGCGTTGAGCTTGGAGATGGTTTAGGTGGCACTCAAGTTATGCAGGTTCCGAGGGCCCCCGTGGTGGAAGGCTTGCCGCTTCCTCCCAATATACAGGAGCCGCACCGGTCTGCGTACAAGTATTTGTTCGAGCTGGTTGGTGCATTGAAACATGTGGTTGTAACAAGGGAGACTGAGAACAGAGCCCGTGTGTCAGCATTGAGAAGCAGAGCCAAGAAACGAAAGGGAAGGAAGAGTAATAGTTGA 2064 0.4259 MDPHKERIKTGCHKILDGINSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVIRALRRSILKMVCASRDIIRLLSRMSYEGLDDQQMNLVLRMKEIAHRIIDKQPRVAITRPNLLVEQVALLDEGMRDSPVVESSKIGDALIDGDQSMSNDDDMLDVEHVLRFENGMNVAQESLSPSCFQQFLLWPPDDCITLEWVQDMMSTFEHVSQKVLPSAFCNIVPTILVDKLTDAASSILCEEPNCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGVPSESQFYVFNGNYVGKGAWGIEVLLVLLAWKVLMPHRIYLLCGNHESRYYTGRYGFENEVWTKYGKQGEYVYNKFLECFKVLPLASVIANCVYTTHGGFFRSKHSAPSRKPKHRKTQRVDLGSLAELSEVKRARIGSPYEGPNILLTDILWSKPSKRNGLRENAGRKYGLWWGPDCTEAFLKRHNLKLIIRSHEGPDARAGQDDFGNMMIGYSLDHDVESGKLYTLFSAPDYPQFGQKRYNNEGAYAILQSPDFASPSFFSFKAAERPTVDPYVDSDADEMDLRAPSSSQIASTSAFCASQRPYPGGSRPIFDFSLLGIHNGPSWSVELGDGLGGTQVMQVPRAPVVEGLPLPPNIQEPHRSAYKYLFELVGALKHVVVTRETENRARVSALRSRAKKRKGRKSNS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00265 687 SMART pp2a_7 225 547 IPR006186 GO:0016787
Aip08g00265 687 Gene3D - 193 577 IPR029052 -
Aip08g00265 687 SUPERFAMILY Metallo-dependent phosphatases 220 553 IPR029052 -
Aip08g00265 687 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 682 - -
Aip08g00265 687 PRINTS Serine/threonine phosphatase family signature 258 285 IPR006186 GO:0016787
Aip08g00265 687 PRINTS Serine/threonine phosphatase family signature 288 315 IPR006186 GO:0016787
Aip08g00265 687 PRINTS Serine/threonine phosphatase family signature 321 345 IPR006186 GO:0016787
Aip08g00265 687 PRINTS Serine/threonine phosphatase family signature 358 384 IPR006186 GO:0016787
Aip08g00265 687 PRINTS Serine/threonine phosphatase family signature 503 519 IPR006186 GO:0016787
Aip08g00265 687 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 4 682 - -
Aip08g00265 687 Pfam Calcineurin-like phosphoesterase 258 477 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00265 Aip-Chr8 1952240 1956382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00265 189 469 Calmodulin-binding Proteins AT5G63870 49.828 4.70e-91 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00265 K04460 - gmx:100779241 826.239