Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00262 ATGGGTGCTCCGGCAAGATGGTTCAAATCATTTCTATCTCTGAAAAAGATCTCAACTACTGATCAAGAGAAGGTTAGCTCTGATAACAAGAGTAAGAAGAAGTGGAAGATATGGAAGAACTCTTCAGAATTGAAGAAGGGTGCTACTGCTGTTGCTTCTGCTTCTCACAAATCTGATTCTTCTTCCTTCACTTCTGCCATGGCTGCACTTGTTCGAGCTCCACCCAAAGATTTCAAGCTCATCAAGCATGAATGGGCTGCCATACGCATTCAGGCAGTCTTTCGAGCTTTTTTGGCTAGGAGAGCTTTGAGAGCCTTGAGGGCAGTGGTAAGGTTGCAAGCTATATTTCGAGGCCGGTTAGTTCGAAAGCAAGCGGTTGTTACTCTAAGGTGCATGCAGGCTCTTGTTAGAGTTCAGGCACGCGTAAGGGCAAGGAAAGTGAGGAACTCTCCAGAAGGGAAGGCAGTGCAGAAATTGTTGGATGAACATCGAAACCTTGCTGATCCAGTTAAGCAGGCTGAGCAAGGATGGTGTGACATTCCTGGGACTGCAGATGAAGTTAAAGCAAAGCTGAGAATGAGGCAGGAAGGAGCCATCAAAAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCATTCAAGAGGGTGTGCTAGTCCAAACTCAAGAGCCTCTAAGGCAGAGGCAATGACTCATTTCAAGCATCAGAACCTAGACAGTAAGAGCTTAGGAAGCAGCTTGTTAGAACACTGGATGGCATCAAAGCCATGGGAGAGTCCAATGTCCAAGAAAAGTGATGATCACATTGTTCAATCAAGAAGGAATGGTGTGACAACCAGGATCTCAGTGAAATCTCTTCCAACAAGTCATTCGACTCCATCGTCTTCGGCGATAAGCTCTGATTGCATGTATGATGATAATAGTCCTGCATCAACATGCACATCAGAGGAAAGAGATGTTGTTCATAAGCCTAGCTACATGAATTTGACAAAATCAACCAAAGCAAAATTGAAGGCTTGCAGGAGTTCTTCACAGAATTCAAAGGATTCTTGTGTGTCTCATAGCACAACACTTGTGAATGGAGATGCTAGTAACAGTGCTGTCTCTGATCCATCAGTTAACTTGTGGAATGGTCTTTGTTCAACACCTCTAAGGGCAAGTTATCAAAGAAGATATGGTAGGAGCCTAGGAGGTAGATAA 1200 0.445 MGAPARWFKSFLSLKKISTTDQEKVSSDNKSKKKWKIWKNSSELKKGATAVASASHKSDSSSFTSAMAALVRAPPKDFKLIKHEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAVVTLRCMQALVRVQARVRARKVRNSPEGKAVQKLLDEHRNLADPVKQAEQGWCDIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQHSRGCASPNSRASKAEAMTHFKHQNLDSKSLGSSLLEHWMASKPWESPMSKKSDDHIVQSRRNGVTTRISVKSLPTSHSTPSSSAISSDCMYDDNSPASTCTSEERDVVHKPSYMNLTKSTKAKLKACRSSSQNSKDSCVSHSTTLVNGDASNSAVSDPSVNLWNGLCSTPLRASYQRRYGRSLGGR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00262 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 126 IPR027417 -
Aip08g00262 399 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Aip08g00262 399 Pfam IQ calmodulin-binding motif 85 104 IPR000048 GO:0005515
Aip08g00262 399 ProSiteProfiles IQ motif profile. 83 111 IPR000048 GO:0005515
Aip08g00262 399 Gene3D - 82 131 - -
Aip08g00262 399 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 393 - -
Aip08g00262 399 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Aip08g00262 399 ProSiteProfiles IQ motif profile. 107 134 IPR000048 GO:0005515
Aip08g00262 399 SMART iq_5 105 126 IPR000048 GO:0005515
Aip08g00262 399 SMART iq_5 82 104 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00262 Aip-Chr8 1915722 1917823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00262 1 379 IQD Protein Family AT1G72670 46.959 3.31e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00262 - - adu:107461327 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00262 08 1915722 1917823 Aip09g00697 09 8432480 8435270 PCT