Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00247 ATGGCGACAAAGGACTCATCATCGGAATTAGAATCACCAAGAAGGCTTCAATACCCACTCGACTCCACCTCATACAAGCTCCTCGACGAGATCGGTTCCGGCGTCAGCGCCGTCGTCTACAAGGCTATCTGCATCCCCATCAACTCCTCCCTCGTCGCCATCAAATCCATCGACCTCGACGGCTCCCGTCCCGACTTCGACGACGTCCGCCGCGAAGTCAAGACTCTCTCCCTCCTCTCCCACCCCAACATCCTCAACGCACACTGCTGCTTCACCGTCGACCACCGTCTCTGGGTGGTCATGCCCTTCATGGCCGGCGGATCCTTCCAATCCATCATCTCTCATTCCTTCCCGGACGGATTCTCAGAGCCATGCATCGCATTCATCCTCAGAGAGACTCTCAACGCTTTGTCCTATCTCCATAGCCAGGGACATCTCCACAGAGACATCAAAGCCGGTAACATTCTCGTCGATTCCAACGGATCCGTCAAGCTCGCCGATTTCGGCGTCTCCGCTTCCATCTACGAGTCAATCATGAGCTCCTCTTCTTCCTCTTCTTCTTCTTCAAGTGTTCCTGGTTGTTGTTCGTGTTCTTCTCTCATGCTCAAAGATGTCGCCGGAACACCGTATTGGATGGCGCCGGAAGTGATCCACTCCCACGTCGGTTACAGTTTCAAGGCTGATATATGGTCGTTTGGGATCACGGCGTTGGAGTTGGCCCATGGAAGGCCTCCACTCTCTCACCTTCCTCCTTCTAAGTCCATGATTCTCAAGATCACCAAACGCTTTCGGTTCTCCGATCTGGACAAGTTTGGCGGCGGTTCCAGCTCCCATGGTAAGAAATTCTCCAAGAACTTCAAGGACATGGTGGCTTCTTGCCTGGATCAGGATCCGGCTAAGAGGCCTACGGCGGAGAAGCTTCTGAAGCATCCGTTCTTTAGAAACTGTAAGGGATCCGAGTTTTTGGTGAAGAACGTGCTGCATGGGTTGCCAAGTGTTGAGAAGAGGTACAAGGAAATCAGCAAGGCTTCTTCTATGAACAATAATAATGATGATGATGATGATGATGATGATCAAGTGAAGCATGGGAAGTTGATGAAGCAAAGAAGGATAAGTGGGTGGAATTTCAATGAAGATGGATTGGAACTTGAACCTGTGTTCCCAAATGATGAAGATGATGAGGCCAAGGCAACAAGAGAAGTTAAAGGTGAAGAAGGTGAGAATGAGAATAATAATGAAAGGTTAAAGGGTATTGAAGGAGTAGCCATGAATGTGAACAACCGTGATGCCATGTTAGCGACACTCAATGTTCTCAAAGGGAGCTTGGAACAAGAGCTTGGACAAGTCAAGGCCTTGATCAACATCTTACGTGCAGATCGTAATCATCATCAAGATCTTGATCATGATCAGCAGCAGTTGGAGTCACAACTAGACACCTTCAAGCTTCACCTTTCTTGA 1458 0.4938 MATKDSSSELESPRRLQYPLDSTSYKLLDEIGSGVSAVVYKAICIPINSSLVAIKSIDLDGSRPDFDDVRREVKTLSLLSHPNILNAHCCFTVDHRLWVVMPFMAGGSFQSIISHSFPDGFSEPCIAFILRETLNALSYLHSQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESIMSSSSSSSSSSSVPGCCSCSSLMLKDVAGTPYWMAPEVIHSHVGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMILKITKRFRFSDLDKFGGGSSSHGKKFSKNFKDMVASCLDQDPAKRPTAEKLLKHPFFRNCKGSEFLVKNVLHGLPSVEKRYKEISKASSMNNNNDDDDDDDDQVKHGKLMKQRRISGWNFNEDGLELEPVFPNDEDDEAKATREVKGEEGENENNNERLKGIEGVAMNVNNRDAMLATLNVLKGSLEQELGQVKALINILRADRNHHQDLDHDQQQLESQLDTFKLHLS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00247 485 MobiDBLite consensus disorder prediction 384 411 - -
Aip08g00247 485 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 479 - -
Aip08g00247 485 ProSiteProfiles Protein kinase domain profile. 25 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00247 485 Gene3D Transferase(Phosphotransferase) domain 1 107 364 - -
Aip08g00247 485 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Aip08g00247 485 Pfam Protein kinase domain 25 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00247 485 MobiDBLite consensus disorder prediction 390 411 - -
Aip08g00247 485 SMART serkin_6 25 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00247 485 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 11 479 - -
Aip08g00247 485 Gene3D Phosphorylase Kinase; domain 1 14 103 - -
Aip08g00247 485 SUPERFAMILY Protein kinase-like (PK-like) 14 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00247 Aip-Chr8 1805736 1807209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00247 15 482 MAP Kinase Kinase Kinase Kinase AT4G14480 56.263 2.23e-180 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aip08g00247 Pkinase 3.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00247 K08835 - adu:107461391 901.353