Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00245 ATGGGGTTACAGCTGATACTATTCCTGTTAATCAAGCTACATTTAGTTCTCTGTATTCCACAGCTTCATCAATATGCAGCAACAAATCTGCACCATTCAAGGGTCAGAAGCCATTCAAGTATTGCATTGCCACCATCTGAGTCATCATATTCTAGAGTTCCTGCATCTATAGCACTTCCTCCTTCCAAGGCATCTTATGGAGTTCATGGAACTACTGCAGTTTCACCATCCAAGTCATTCTCCAAAGCTCCTACAAAGATGTGGATTCATGGTTATGTGGATTCTCCAATATCATCACATCATAAGCACCACAATTACAAAAGAAAGTTTAGAAACCAAACTCCTGAGCCAACCTACCCAAACAATCCTCATACTCATCAAGGTACTTCAGTCTTCAAATCACAGCCTCATTTCTTTTCACCAAAAAGCTGGAATTCTGCTGCACCTGCACCATCACCATCACCATCAGTTTTATCAGAACACTTGAATGTGCCCTCTCCCTCCCCAAGAATTTCACCTCTAGGTTCATCATTGAATAAGATAAAGACTCCACCACCAGCATATGCTTTGGTTCTTCCACCTCCACCACCTAATAAGGATTGCATGATGGTGACTTGCTCAGAGCCATTGACAAATACACCTCCTGGATCTCCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAACTCCACATCAGCATTGCAATATACAAGTTCTTCCCTTTGGTTTTCAAGCTAGCTGAGGAAATTGCAGCCAGTCTTTTGTTGAGTCGCAACCAGGTTCGCATTGTTGGAGCTAATGCAGCAAATCATCAACTAGAGAAAACCACTGTTCTCTTAAATTTGGTACCTCAAGGAGTTAAGTTTGATGATACAACAGCATTCTTGATATACAAGAAATTCTGGCACAAAGAAATTCTCACTGATGCTTCCCTTTTTGGTGCCTATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCTTCTCCACCTTCAAGTCCTTTTGATGTTTCTGGTATAGTTGACCCAGATGCTGTTGGTAATGATGGGAATTTAATAAAGCCTTTAGGAGTTGATGTCTCTAATAAGAAGAAAAAAGAAGGGAATGGCGAAAGAACGGTTGGTATGCTCGTGTTGTCCTGTTTTGCAGCTTCTGTTCTGTTCATTGGAGTTACTTGGCTTTGTCTATTGAAATGCCACTGTCCAGCCCTTGAAACTGAACAAGCTACAGATGTTATAATTGCACCCTCTTTCAAAAATTCAGGCATTGCCAGGTCATTGCCTTATGAGAACATGGTGAATTCTAGATCAACCTCAACCAATTCTGGAACAATAGCATATGCAGGATCAGCTAAGATATTCAGTTTGAATGAAATAGAGAAAGCAACAAATAGCTTCAGTTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGCCTTGTTTACAAAGGAGGCCTACAAGATGGGAGGGATGTTGCAGTGAAAATTCTCAAAAGGGATGATCATCATGGCGGCCGCGAATTTTTGGCCGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATTGAGAAACAGAGTCGTTGCCTTGTCTATGAGCTTGTTCCTAATGGAAGTGTAGAATCCCACTTACATGGTTCAGACAAGGAAACAGGTCCACTTGATTGGGATGCACGGATGAAGATTGCGCTTGGCGCTGCTCGAGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCCAGCAATATCTTGTTGGAACATGACTTCACACCCAAGGTATCAGATTTTGGATTGGCTAGAACAGCACTTGATGAGAGAAACAAGCACATTTCCACACATGTTATGGGCACATTTGGGTATCTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTGAAAAGTGATGTTTACAGTTATGGAGTAGTCCTCCTAGAGCTCCTAACCGGGAGAAAGCCTGTGGACTGGTCGCGATCGCCTGGTCAAGAATACCTTGTTGCTTGGGTTCGTCCGCTTCTCACAAGTAAAGAAGGTTTGGAGATGATTATAGACCCGGATATAAAGCACAGCATTTCTCTTGACAGCATACTAAAAGTTGCAGCCATTGCATCCATGTGTGTGCAAGAAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTGCAGGCCTTGAAGTTGGTATGCAGTGAGTTTGAGGAGACAGACTATGCAATACAGGCAAGTTTTCAAGATGATGTACAAGGGAAGTTTTCCAAAAGTTCAGATGAGAGAGTGGATTTTTCAGTGTAA 2331 0.4208 MGLQLILFLLIKLHLVLCIPQLHQYAATNLHHSRVRSHSSIALPPSESSYSRVPASIALPPSKASYGVHGTTAVSPSKSFSKAPTKMWIHGYVDSPISSHHKHHNYKRKFRNQTPEPTYPNNPHTHQGTSVFKSQPHFFSPKSWNSAAPAPSPSPSVLSEHLNVPSPSPRISPLGSSLNKIKTPPPAYALVLPPPPPNKDCMMVTCSEPLTNTPPGSPCGCVWPLQVKLHISIAIYKFFPLVFKLAEEIAASLLLSRNQVRIVGANAANHQLEKTTVLLNLVPQGVKFDDTTAFLIYKKFWHKEILTDASLFGAYEVLYVHYPGLPPSPPSSPFDVSGIVDPDAVGNDGNLIKPLGVDVSNKKKKEGNGERTVGMLVLSCFAASVLFIGVTWLCLLKCHCPALETEQATDVIIAPSFKNSGIARSLPYENMVNSRSTSTNSGTIAYAGSAKIFSLNEIEKATNSFSSSRILGEGGFGLVYKGGLQDGRDVAVKILKRDDHHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQSRCLVYELVPNGSVESHLHGSDKETGPLDWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSRSPGQEYLVAWVRPLLTSKEGLEMIIDPDIKHSISLDSILKVAAIASMCVQEEVTQRPFMGEVVQALKLVCSEFEETDYAIQASFQDDVQGKFSKSSDERVDFSV 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00245 776 MobiDBLite consensus disorder prediction 111 176 - -
Aip08g00245 776 SUPERFAMILY Protein kinase-like (PK-like) 440 738 IPR011009 -
Aip08g00245 776 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Aip08g00245 776 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00245 776 Gene3D Transferase(Phosphotransferase) domain 1 541 762 - -
Aip08g00245 776 CDD STKc_IRAK 471 739 - -
Aip08g00245 776 Gene3D Phosphorylase Kinase; domain 1 436 540 - -
Aip08g00245 776 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Aip08g00245 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Aip08g00245 776 PANTHER OS01G0750732 PROTEIN 7 763 - -
Aip08g00245 776 MobiDBLite consensus disorder prediction 112 176 - -
Aip08g00245 776 PANTHER OS01G0750732 PROTEIN 7 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00245 Aip-Chr8 1776145 1780068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00245 198 765 Receptor kinase-like Gene Family AT5G56890 61.512 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aip08g00245 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00245 - - gmx:100814040 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00245 08 1776145 1780068 Aip09g00644 09 7551792 7556535 PCT