Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00236 ATGGACAAAAATGTTTGGATTGTGTTTGTGACACCATTACTCTTGTTCTTCATCCTCTTCTACAGAAGGATCACATGGCTTAGACTCATCAAATCTAAACACATGAATAATCAACTTCCCTTAGGCACTCTTGGATGGCCTTTTGTTGGTGAAACCATTGAGTTTATTTCCTGTGCCTACTCTGATCATCCTGAGAGCTTCATGGACAAGCGTCGCAGCATGTATGGGAAGGTGTTTAAGTCTCACATATTTGGGAGCCCAACAATTGTGTCCACAGATGCAGAAGTTAATAAGTTCATTCTGCAAAGTGATGCAAAGGCTTTTGTTCCTTCCTATCCCAAGTCTCTGACTGAGTTGATGGGAAAGTCTTCCATTTTGCTCATCAATGGAAGCTTGCAGAGGAGAATACATGGACTAGTTGGAGCTTTCTTCAAGTCTCAGCAGCTTAAGGTTCAGATCACTAGAGAGATGCAGAACTATGTCCAACAATCAATGACTAATTGGAAGGAGGATCAACCTGTATACATACAAGATGAGACAAAAAATATTGCCTTTCAAGTACTAGCCAAGGCATTGATTAGTTTGGATCCTGGTGAAGAAATGGAGCTTCTGAAGAAACATTTTCAGGAATTCATGTCTGGCCTCATGTCTCTACCAATAAATTTGCCAGGAACTAAACTTCATCAATCCTTACAGGCAAAAAAGAAGATGGTGAAGTTAATGCTGAGAACTATTGAAAGTAGAAGAGAATGTGGAATCTCCAAAGTTCCAAAAGATGTGGTGGATGTGCTTCTGAATGATGAAAATGACAGGTTAACAGATGAATTAATAGCAGATAATATGATTGATATGATGATTCCAGGGGAGGATTCAGTGCCAGTTCTTATGACTCTTGCTGTAAAGTATTTATCAGAATGCCCCACTGCTTTGCAACAATTGAGAGAGGAGAATGTGAAGCTTAAGAAACTCAAAGATCAGCTTGGGGAGCCCTTGAATTGGAGTGATTACTTATCATTACCATTTACTCAAACAGTTATCACAGAAACTTTGAGGATAGGAAATGTAATAATTGGAGTTATGAGAAAGGCTATGAAAGATGTAGAAATAAAAGGGTATTTTATACCAAAAGGATGGTGTGTGTTAGCATATTTTAGATCAATTCATCTAGATGACAAAAACTATGACAAGCCTTACCAATTCAATCCATGGAGGTGGCAAGACAAAGACACAAGCACTTGCAATTTCACTCCTTTTGGAGGTGGACAAAGATTGTGCCCTGGCCTTGACTTGGCTAGGCTTGAGGCTTCTATCTTCTTGCATCACTTGGTCACTCAATTTAGATGGTATGCAGAAGAAGATACAATTGTGAATTTCCCAACAGTAAGAATGAAAAGGAGGATGCCAATCTTGGTTAGAAGAGTGGAATCTTAG 1431 0.3913 MDKNVWIVFVTPLLLFFILFYRRITWLRLIKSKHMNNQLPLGTLGWPFVGETIEFISCAYSDHPESFMDKRRSMYGKVFKSHIFGSPTIVSTDAEVNKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQRRIHGLVGAFFKSQQLKVQITREMQNYVQQSMTNWKEDQPVYIQDETKNIAFQVLAKALISLDPGEEMELLKKHFQEFMSGLMSLPINLPGTKLHQSLQAKKKMVKLMLRTIESRRECGISKVPKDVVDVLLNDENDRLTDELIADNMIDMMIPGEDSVPVLMTLAVKYLSECPTALQQLREENVKLKKLKDQLGEPLNWSDYLSLPFTQTVITETLRIGNVIIGVMRKAMKDVEIKGYFIPKGWCVLAYFRSIHLDDKNYDKPYQFNPWRWQDKDTSTCNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVRRVES 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00236 476 SUPERFAMILY Cytochrome P450 37 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 28 469 - -
Aip08g00236 476 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Aip08g00236 476 Gene3D Cytochrome P450 30 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00236 476 PANTHER CYTOCHROME P450 26 28 469 - -
Aip08g00236 476 Pfam Cytochrome P450 40 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00236 Aip-Chr8 1692496 1696826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00236 30 447 Cytochrome P450 AT3G13730 68.322 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00236 K12638 - gmx:100782687 788.489