Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00231 ATGATGAGTCGAGAACAGCATAAGCGAGGGAAGGAAGAAAAAGGTTCAGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCAAAGGAAATTCCAAAGACAGCACTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTAATAGTGGTTGTGCCTTCTTCACAAAGTTTTGGAAGAAGATTATGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAACACTCAAAAGAAATCTCATTCTCCAACTAGTTCAGAGCAGAAGAGTGAGATTACTGATTCTTTCTCTCAGATGATTCTTCAGCTCCATGACATCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCTAGAAAGGCCCAAGCCAATTGGGTTGTATTAGACAAGCAGCTAAAACAAGAAGAAAAGCAGTGTATGGAAGAGCTGCATTGCAACATTGTTGTTATGAAACAATCCCAAGCGAAAGTGCTCCGGTTGAATTTGAATGGATCACAAAAGAAGGATCTTGAAGAAGCAGCTCCATTACATTCCAAGCAAGATGGGAAGCTTGGAAGACAAGCCAAGAATAAGAATGATTCTTTGAGTTCCATAAAAGGAGCAGTTGTCACCCCAACTAGTAGTCCAGATGTAGGGACGCCTTCTACTGCGACTGAAGCCGGTACTTCATCTGTTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTGTTTCTGAGATGAATAATGGTGAGTCAAAGAAAGAGGAAACTATTAAACGAAATGAAGAAGTTGATGCTAGTTCAGACTCGGATAGCGAAAAGTTGTCCCTATCCTCAGCAACCTTGAGATTCCAACCATGGATCAAAGATTTACTTTTATGCAAACAATCATCTCAATGCAGAGAAGAAGGATGCCATAGCAAGAATCAAACATCCACAGCTAGAGCTTTGATGGAAAAGTTCTCAAGGCTAGAAAGAGAAGCTGAAATGGAGATCTCAAGCCATATGAATGAGTTGGATTTGAGTGGAAATGTAAGAGAAGCAATAACATTATCAAGAAATGCTCCACCTGGTCCACCTCCATTGTGTTCAATATGCCAACACAAGGCTCCTGTTTTTGGGAAACCTCCAAGGTGGTTCAGCTATGCGGAGTTGGAACTCGCTACGAGTGGATTCTCTCAAGCTAATTTCTTGGCAGAAGGGGGATTTGGCTCTGTTCACAGAGGGGTCTTACCTGATGGACAAGTCATTGCTGTGAAGCAGCATAAACTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCAGAGGTTGAAGTCCTCAGCTGTGCTCAGCATCGAAACGTTGTAATGCTCATTGGATTCTGTATTGAGAATAAGAGAAGGTTGCTGGTTTATGAGTACATATGTAATGGATCTCTGGACACTCACTTATATGGGAAAAAACAGGAACCATTAGAATGGTCAGCGCGTCAAAGAATTGCCGTTGGAGCTGCTAGAGGCTTGAGATATCTTCATGAGGAGTGCAGAGTAGGCTGCATTATCCACCGTGACATGCGGCCGAATAACATTCTTATCACCCATGATTTTGAGCCACTGGTTGGTGATTTTGGGCTAGCAAGGTGGCAGCAACATAGAGACACTGGTGTGGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACAGAAAAGGCTGATGTTTACTCCTTTGGGGTGGTATTGGTGGAGCTTGTTACCGGACGAAAAGCTGTCGATCTTAGCAGGCCGAAGGGGCAGCAATGTCTTACTGAATGGgCACGACCATTGCTAGCAGAATATGCAATTGAGGAACTAATTGATCCGAGATTGGGAAATAACTATGCAGAAAATGAGGTCAATTGCATGCTTCATGCAGCTTCATTATGCATGAGGAGAGATCCTTATTCCAGACCACGCATGTCACAGGTTCTCAGAATACTGGAGGGTGACATGATCATGGACACAAATTACATTACAGCTACCACTCCCACCACCACATAA 2076 0.4302 MMSREQHKRGKEEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLIVVVPSSQSFGRRLWGFPRFAGDCANTQKKSHSPTSSEQKSEITDSFSQMILQLHDIYDPNKINVKIKIVSGSPCGAVAAEARKAQANWVVLDKQLKQEEKQCMEELHCNIVVMKQSQAKVLRLNLNGSQKKDLEEAAPLHSKQDGKLGRQAKNKNDSLSSIKGAVVTPTSSPDVGTPSTATEAGTSSVSSSDPGTSPFFVSEMNNGESKKEETIKRNEEVDASSDSDSEKLSLSSATLRFQPWIKDLLLCKQSSQCREEGCHSKNQTSTARALMEKFSRLEREAEMEISSHMNELDLSGNVREAITLSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATSGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIENKRRLLVYEYICNGSLDTHLYGKKQEPLEWSARQRIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQQHRDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTEWARPLLAEYAIEELIDPRLGNNYAENEVNCMLHAASLCMRRDPYSRPRMSQVLRILEGDMIMDTNYITATTPTTT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00231 691 MobiDBLite consensus disorder prediction 206 257 - -
Aip08g00231 691 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
Aip08g00231 691 ProSiteProfiles Protein kinase domain profile. 402 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00231 691 MobiDBLite consensus disorder prediction 186 285 - -
Aip08g00231 691 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Aip08g00231 691 MobiDBLite consensus disorder prediction 187 205 - -
Aip08g00231 691 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 17 685 - -
Aip08g00231 691 Gene3D Transferase(Phosphotransferase) domain 1 478 685 - -
Aip08g00231 691 SUPERFAMILY Protein kinase-like (PK-like) 386 678 IPR011009 -
Aip08g00231 691 CDD STKc_IRAK 408 674 - -
Aip08g00231 691 CDD USP_Like 21 145 - -
Aip08g00231 691 Pfam Protein tyrosine and serine/threonine kinase 406 671 IPR001245 GO:0004672|GO:0006468
Aip08g00231 691 MobiDBLite consensus disorder prediction 259 280 - -
Aip08g00231 691 PANTHER OS01G0253100 PROTEIN 17 685 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00231 Aip-Chr8 1665463 1670477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00231 389 673 Trihelix Transcription Factor Family AT5G38560 54.452 1.73e-103 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip08g00231 PK_Tyr_Ser-Thr 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00231 - - gmx:100789216 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00231 08 1665463 1670477 Aip08g00231 08 1665463 1670477 ECH
Aip08g00231 08 1665463 1670477 Aip09g00614 09 7193034 7196884 PCT