Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00214 ATGATAGGAATTTTCCTGCTTTTAGTATTTCAACTTCTGTGGAATCTTCCTATCATTGTTCATGCCCAGAATCAATCAGGCTTTGTTAGCATTGATTGTGGACTTGTGGATGAAGCAAGTTACAAAGATGAAACAACTTCCATATATTACATTTCAGATGCCAGCATCATAGACACTGGTGAATGCCACAACATATCACCCAAATATAAGGCCTCTTCACTTGCCAAACAGTTCTGGAATGTTAGAAGTTTCCCAGAAAGAATCAGAAACTGCTACTCCCTTAAGGTCCCTCAAGGAAGAAGCAGCAAGTATCTAATAAGGGCAAGGTTCATGTATGGAAACTATGATGGTAAAGATTCACTTCCTCAATTTGATATCTATCTTGGAACCAAATGGTGGGAATCTCTAGTGTTTGAGGATCCAACCAGTGTAATAACCAAGGAAATCATCTTTGTTGCTTCCTCGGATTATGTTCATGTTTGCTTAGTTAACACCAACAAGGGTACACCTTTCATATCAGCTTTAGAGATTAGAGTTCTTGACAGTGATGCCTATCTGATTAACTCCATGGAGCTTCTCGCCCGGTATGACATAGGATTACAGGAAGATAAAACAGTCAGATACCCAGATGATGTCCATGATAGAATATGGACACCTTACAATTCAAAAGATTGGAAACAGATAAACACTTCTCTTGCTATAGACAAAGAATCAACTTCATACAACTTTTTACCATTACCAGCCTCTACAGTGATGGAAACAGCAGCAATTCCAACAAATAACAATGATAATATAGAATTTAACTTCTATCCCAAGGATAATGCCTCTGCATACTATGTGTACTTCTTCGTTGCCGAAATCCAGAAACTTGAAGCAAATCAATTTAGAGACTTCAACTTTTTTGTGAATGGGTATCTTCTTAATGGTTCTCCAGTGAATCTTAAGTACCTGCAGAGCGTGTATTACATATCAATTTTGGAAAAACCTCGGTTGGAAGTTTGGATTAACAGAACAAGCAGATCAACACTTCCACCTCTTTTCAGTGCCATTGAGATATATATGACTAAGAATTTCTCACAATCACAAACAGACCAAACTGATGCTTCTGCTATCATGAATGTGAAGTCAAATTATGGGATAAAAAGAAATTGGCAAGGAGATCCATGCATTCCACTAAGTTACATGTGGGATGGTGTTAGTTGCAGCTATGCTGGTTCTTCTTCTCCAAGGATCATATACTTGAACTTATCTTCCAGTGGTTTAACTGGAAATATAACATCAGCCATATCCAATTTGAAGTCAATAGAATATTTGGATTTATCAAACAACAGTTTGACAGGATCAGTGCCTTATTTCTTATCTCAACTTCACTCCTTAAGAGTTCTGAACCTGGAAGGGAATCAGCTAACAGGAGCAGTTCCAATGCAACTCAGAGAGAATTCAAATAATGGCATGCTCAAAACCAGTTTTGGAGGAAATCAAGGTCTTTGCTATTCAGGTTCATGCAGCAATAGTAATAAAGTTGTGGTTCCATTGGTGGCATCACTAGGTGGAGCTTTTGTGATTCTGGCAACAGCAATCACTTCTTTCTTCATATTCAAAAGACATAGAGCCTCTGAAATGGGGAATCTGAGAGCATATTCAAGAATAAAGATGGAGTTAGAGTCAAATAAACAGCAATTTAGCTATGCTGAAGTCCAAAAAATTACCAAAAATTTTAAAAGGGTTGTGGGAAAAGGAGCATCTGGAACAGTGTATCATGGCTATGTAGGTGATACTGAAGTTGCTGTCAAAATGCTGTCTCCTTCAGACTCAAACTCAGCCCAAGCATATCTACAATTTCAGGCAGAGGCAAAACTTCTGGCTGTAGCTCATCATAAATGCTTGACACCTCTTATAGGATATTGTGATGATGGCACAAACATGGCTCTCATCTATGAATACATGCCTAATGGAGACTTAGCCTACCACTTATCAGATAAAAGTGAAACTATATTGAGTTGGCAACAAAGAATTCAAATTGCAGTGGATACTGCAGAAGGATTGGAGTATCTACATGAAGGTTGTTGTCCAGGAGTTGTTCACAGAGATATAAAGTCAAAGAACATATTACTAACTGAAAAATTTAGAGGAAAATTGGCTGATTTTGGTTTGGCCAAGATCTACCCTAATGAAAATGATACACACATGTGCACTGTGGTTGCTGGCACCCCCGGATACCTTGATCCGCTGTACCACAGATCAAGCAAGTTGAGTGAAAAAAGTGATGTTTATAGTTTTGGAGTGGTTTTGCTTGAGATAATTACAGGGCATCCAGCCATAACCAAAACAGAAGAGAAAGTTCACATAATTAGATTGGTTGGATCAATGCTTAGTGAAAGGGAGGTGAATGATATTGTGGATCCAAGATTAGAAGGAAACTTTGATGTTGACTCTGCAAAGAAAGTCTTGGATATTGCAATGGCTTGTGTAGCAGCTGCTTCCATTAACAGGCCAGCAATGAGTTATGTTGTTGCTCAACTCAAAAAATGTTTGCCAGCTGATGATGATAATGTTGAAAATAGGATTACTGTAGTTAATCATCTGTTGCATGATTCTGACATTCATCAAAGTTTACCGGCCAGCATTATTGATATAATTAGTGGACAGAGCTCTCTAGAAAGGTAG 2667 0.3813 MIGIFLLLVFQLLWNLPIIVHAQNQSGFVSIDCGLVDEASYKDETTSIYYISDASIIDTGECHNISPKYKASSLAKQFWNVRSFPERIRNCYSLKVPQGRSSKYLIRARFMYGNYDGKDSLPQFDIYLGTKWWESLVFEDPTSVITKEIIFVASSDYVHVCLVNTNKGTPFISALEIRVLDSDAYLINSMELLARYDIGLQEDKTVRYPDDVHDRIWTPYNSKDWKQINTSLAIDKESTSYNFLPLPASTVMETAAIPTNNNDNIEFNFYPKDNASAYYVYFFVAEIQKLEANQFRDFNFFVNGYLLNGSPVNLKYLQSVYYISILEKPRLEVWINRTSRSTLPPLFSAIEIYMTKNFSQSQTDQTDASAIMNVKSNYGIKRNWQGDPCIPLSYMWDGVSCSYAGSSSPRIIYLNLSSSGLTGNITSAISNLKSIEYLDLSNNSLTGSVPYFLSQLHSLRVLNLEGNQLTGAVPMQLRENSNNGMLKTSFGGNQGLCYSGSCSNSNKVVVPLVASLGGAFVILATAITSFFIFKRHRASEMGNLRAYSRIKMELESNKQQFSYAEVQKITKNFKRVVGKGASGTVYHGYVGDTEVAVKMLSPSDSNSAQAYLQFQAEAKLLAVAHHKCLTPLIGYCDDGTNMALIYEYMPNGDLAYHLSDKSETILSWQQRIQIAVDTAEGLEYLHEGCCPGVVHRDIKSKNILLTEKFRGKLADFGLAKIYPNENDTHMCTVVAGTPGYLDPLYHRSSKLSEKSDVYSFGVVLLEIITGHPAITKTEEKVHIIRLVGSMLSEREVNDIVDPRLEGNFDVDSAKKVLDIAMACVAAASINRPAMSYVVAQLKKCLPADDDNVENRITVVNHLLHDSDIHQSLPASIIDIISGQSSLER 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00214 888 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 881 - -
Aip08g00214 888 Gene3D Phosphorylase Kinase; domain 1 553 648 - -
Aip08g00214 888 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Aip08g00214 888 Gene3D Ribonuclease Inhibitor 368 489 IPR032675 -
Aip08g00214 888 Pfam Malectin-like domain 31 354 IPR024788 -
Aip08g00214 888 Gene3D Transferase(Phosphotransferase) domain 1 649 865 - -
Aip08g00214 888 Pfam Leucine rich repeat 413 469 IPR001611 GO:0005515
Aip08g00214 888 PANTHER OS07G0107800 PROTEIN-RELATED 10 881 - -
Aip08g00214 888 Pfam Protein tyrosine and serine/threonine kinase 573 841 IPR001245 GO:0004672|GO:0006468
Aip08g00214 888 SMART serkin_6 571 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00214 888 ProSiteProfiles Protein kinase domain profile. 571 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00214 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Aip08g00214 888 SUPERFAMILY Protein kinase-like (PK-like) 553 841 IPR011009 -
Aip08g00214 888 SUPERFAMILY L domain-like 375 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00214 Aip-Chr8 1528939 1533165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00214 18 845 Receptor kinase-like Gene Family AT2G19210 49.169 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip08g00214 Malectin_like 8.5e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00214 - - pvu:PHAVU_005G162000g 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00214 08 1528939 1533165 Aip08g00214 08 1528939 1533165 ECH
Aip08g00214 08 1528939 1533165 Aip09g00514 09 5505959 5512270 PCT