Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00213 ATGTGGAGGACTATTTTGAACGTTGCTTTGCTAGCTTTTCTAGTTCATGCAGTTGTGCTTCAAGCTCTGGATCAATCAGGGTTCATCAGCATAGATTGCGGAGCCTTGCCCAACTCTACTGATTGGAAAGACATACAATATATTTCAGATGTCGGTATCATTAGCAGTGGTGTAGCTAAATCAGTGAGTTCTGACTCCATAAGTTACTTCAAACATAATCAACTGTGGACTCTGAGAAGCTTCCCGGAAGGAAGAAGAAACTGCTACAAGATAAACAACATCACAATAGGCTCCAAATATCTGATCCGCCTTGAGTTTGCGTACGGAAACTACGACGGGAGTAAAACTTTTCCAAAGTTTGATGTGTATCTTGGAGTTAACAAGTGGGATACAGTAAGCTTTGGAAACGCCACGCTTAATCCCTACGGGTACGAGACCGAAGAGATTATACATATAGCTTCACAGGAATACATAAATATCTGTTTGGTGAATACAGGCCATGGCACACCATTTATATCAACCATAGATTTGAGGCCTTTGAAAAATGATACCTATTCCATCACTTCTCCATCTGCTTTTGGATCACTGGTTAACTACTACCGTGACGATTTCGGTTATTCATCCAGCGACGACGACGATGACGACTATATCAGGTACGTGGATGATCCCTTTGATCGTCAATGGAGAATCTTCATGCAACCTGATTGGGTAAAATTGTCTGATTCAAGTATTACAACTGCTGATGCCTTTAGCAAGAATGATTACCAGTTGCCAGCAGGTGTCATGAATACCGCGATCACACCGGCAAATGCAAGTGATCCATTAGTGATAAACTGGAGGCCAGAAATTCCAATAAGTGATGTATACTATATATACATGCATTTTATGGAGGTTGAGGCTGAGTCGAACAACAACGAAATAAGGGAATTTAACATCTTTGTGGACGGTAAGCTATTCTCTGAAAAACCCGTGCAGCCGCCCTACCTCTCTACAAAAACAATCAGAGTCGTAGTCCCGAACTCGGTTGATATTTCACTCGAAAAAACGCCGCTTTCAACCCTGCCTCCCATCATCAACGCCATTGAAGTTTACGAATTAATTCAATTCCACCAATTGGATACATTCCAAGCAGATGTTGATGCCATCACAAGGATCCAGTCCGTCTATGGTTTGGCAATAAGAGAAGAGTGGCAAGGGGATCCATGCGGCCCCGCAGGCTACATGTGGGAGTGGGACGGTCTCAATTGTACTCGTCATCTAAATGAATCCCCTAGGATTACTGCCTTAAATTTATCTTCTAGTGGATTGACGGGAGCTATAGATCCTTCCTTTTCACACCTCACTATGTTGGAAAAGTTGGATTTGTCAAACAACCACTTGAATGGCCAAGTTCCGGAGTTTCTCTCTCAATTACAAAACTTAAAAATTTTGAACTTGGCGGGAAATAACCTCAGTGGTTCATTACCTTCAACACTACTTGAGAAATCTAACAAAGGTTTCTTATCACTCAATGTTGATCAAAATCCATATCTACTATGTGAATCTGGAGAATGCAAAGTAAAAAAGAAGAAAAAGAAGACAAAGCCATTCTTAGTAGCTGCAGCTATTGGGCTTTCAGTCGTTTTAGTGGCAGTGACCGCCGCAGCTATAGTCTGGACTCTTAATAAAAGGAGAAAAACCAAAGGTAATAAATATGAATCTCACTATATTATCTGCAAAATCCATATACATGCATTAGAAATTACTCCAAAGGAGATCAAGCAAGAGGATGATGTATCACTCAAGTTCAAGAATAAAATCTATTCATACTCTGATATCCTTAAAATCACCAACAACTTCTGTCAAATCCTTGGTAAAGGTGGATTTGGAACAGTTTATATGGGATATGTTGATGATGCTCCAGTTGCAGTGAAGATGCTTTCTCAATCCTCAGTTCAAGGTTATCAGCAATTCCAAGCAGAGGTTAAGCTTCTAATGAGAGTTCATCACAGAAATTTGACCTCCCTTGTTGGATACTGTAATGAAGGAAGCAATAAGGCTCTCATATACGAGTATATGGCTAATGGAAACCTACATGAACATCTCTCATCAGGTACCAAATTCCTGAGCTGGAAAGACAGGCTCTGTATAGCAGTAGATGCAGCACAAGGATTGGAATATTTACACAATGGTTGCAAGCCACCTATAATCCACAGAGATGTAAAAGCTTCAAACATTTTGTTGACTGAAAACTTGCATGCAAAATTATCTGATTTCGGTTTGTCAAAGATTATCCCAATCGATGGGGGCAGTCATGTTTCAACTGTTGTTGCCGGCACCGCTGGTTACTTGGACCCCAATTACTACCAATCAAGCAGATTAACAGAGAAAAGTGATATTTATAGTTTTGGAGTTGTTCTTTTGGAGTTAATCACAAGTCAAGCAGCAATAAGAATGGCAGAAGATGATGATGATGATGATGAGAAAACTCACTTAAGTCATTGGGTTAGTTCGATGGTGGAGAGAGGGGATATCCATGGCATTGTTGACTCGAGGTTAGGGAGAGACTTTGACTGTAGCTCTGCCTGGAAGGTTGTGGAAACAGCAATGGCTTGTGTGTCACAAAGCTCTAATGAAAGACCAATCATGAGTGAGGTATTGATTGAACTCAAGAACGCTTTGGCCATGGAATTAAGTCAAACAAAATATGGTGGTGGTGGCAACAAAAGTAATGGAGATTCATCGGTTGAACTAGTCTTTGTGAATGTAACATTCAAGGAGCTGTCAAAATACCCTCCCCTTCAGCTCAAGGGTACCAGCAATTCAAGGCAGAGATACTTTATGTTAAACAGGCTGAATGAAAAGAGTGATGTTTCTAGCTTCGGTATTGTTTTGCTTGAGATCATTACTGGCCAACTTCTTATATCCAAAACTGAGGAAAGAACTCACATAGTTGAATGGCTGCGCGAAAGCGAAAGGGAGGTTGAAGATGTTGTTGACTCAAGACTAAATGTATTGAATCCTGTTCCATTAATAGGCCAACCATGA 3027 0.4063 MWRTILNVALLAFLVHAVVLQALDQSGFISIDCGALPNSTDWKDIQYISDVGIISSGVAKSVSSDSISYFKHNQLWTLRSFPEGRRNCYKINNITIGSKYLIRLEFAYGNYDGSKTFPKFDVYLGVNKWDTVSFGNATLNPYGYETEEIIHIASQEYINICLVNTGHGTPFISTIDLRPLKNDTYSITSPSAFGSLVNYYRDDFGYSSSDDDDDDYIRYVDDPFDRQWRIFMQPDWVKLSDSSITTADAFSKNDYQLPAGVMNTAITPANASDPLVINWRPEIPISDVYYIYMHFMEVEAESNNNEIREFNIFVDGKLFSEKPVQPPYLSTKTIRVVVPNSVDISLEKTPLSTLPPIINAIEVYELIQFHQLDTFQADVDAITRIQSVYGLAIREEWQGDPCGPAGYMWEWDGLNCTRHLNESPRITALNLSSSGLTGAIDPSFSHLTMLEKLDLSNNHLNGQVPEFLSQLQNLKILNLAGNNLSGSLPSTLLEKSNKGFLSLNVDQNPYLLCESGECKVKKKKKKTKPFLVAAAIGLSVVLVAVTAAAIVWTLNKRRKTKGNKYESHYIICKIHIHALEITPKEIKQEDDVSLKFKNKIYSYSDILKITNNFCQILGKGGFGTVYMGYVDDAPVAVKMLSQSSVQGYQQFQAEVKLLMRVHHRNLTSLVGYCNEGSNKALIYEYMANGNLHEHLSSGTKFLSWKDRLCIAVDAAQGLEYLHNGCKPPIIHRDVKASNILLTENLHAKLSDFGLSKIIPIDGGSHVSTVVAGTAGYLDPNYYQSSRLTEKSDIYSFGVVLLELITSQAAIRMAEDDDDDDEKTHLSHWVSSMVERGDIHGIVDSRLGRDFDCSSAWKVVETAMACVSQSSNERPIMSEVLIELKNALAMELSQTKYGGGGNKSNGDSSVELVFVNVTFKELSKYPPLQLKGTSNSRQRYFMLNRLNEKSDVSSFGIVLLEIITGQLLISKTEERTHIVEWLRESEREVEDVVDSRLNVLNPVPLIGQP 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00213 1008 PANTHER PUTATIVE-RELATED 938 997 - -
Aip08g00213 1008 SMART serkin_6 611 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00213 1008 Pfam Leucine rich repeat 424 484 IPR001611 GO:0005515
Aip08g00213 1008 Pfam Protein tyrosine and serine/threonine kinase 614 880 IPR001245 GO:0004672|GO:0006468
Aip08g00213 1008 SUPERFAMILY Protein kinase-like (PK-like) 593 882 IPR011009 -
Aip08g00213 1008 ProSitePatterns Protein kinases ATP-binding region signature. 617 638 IPR017441 GO:0005524
Aip08g00213 1008 ProSiteProfiles Protein kinase domain profile. 611 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00213 1008 Gene3D Ribonuclease Inhibitor 385 503 IPR032675 -
Aip08g00213 1008 SUPERFAMILY L domain-like 420 497 - -
Aip08g00213 1008 Gene3D Transferase(Phosphotransferase) domain 1 925 1003 - -
Aip08g00213 1008 Gene3D Transferase(Phosphotransferase) domain 1 686 898 - -
Aip08g00213 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Aip08g00213 1008 PANTHER OS07G0107800 PROTEIN-RELATED 938 997 - -
Aip08g00213 1008 PANTHER OS07G0107800 PROTEIN-RELATED 13 904 - -
Aip08g00213 1008 Gene3D Phosphorylase Kinase; domain 1 593 685 - -
Aip08g00213 1008 Pfam Malectin-like domain 31 365 IPR024788 -
Aip08g00213 1008 PANTHER PUTATIVE-RELATED 13 904 - -
Aip08g00213 1008 CDD STKc_IRAK 617 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00213 Aip-Chr8 1522080 1528190 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00213 13 904 Receptor kinase-like Gene Family AT2G19210 45.000 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip08g00213 Malectin_like 1.5e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00213 - - adu:107492765 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00213 08 1522080 1528190 Aip08g00213 08 1522080 1528190 ECH
Aip09g00514 09 5505959 5512270 Aip08g00213 08 1522080 1528190 PCT