Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00203 ATGGGAAAAGCTAGCAGGTGGTTGAAGGGGTTATTGGGATTGAAGAAGGAGAAGGATAGCTATGACAATTGTGGTTCAATGGCTGCTTCTACTGACAAGAAGGAGAAGAAACGTTGGAGTTTTGCAAAGTCTGCCAAAGATGGAGATTTGACTCAAAATGCTTCTACAAATTATGGAGTCAGGGGCTCTGACTCTGACTCTGCTGATGCTTGGATCAGATCTTTTGTGAGGCTAACAAGCCATGGAAGAGGAACATTGTTTAGTGGAAGCAGGGAGAAGTGGGCTGCATTGAAGATCCAATCTTATTTCAGAGGTTACTTGGCTAGGAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTAGTTAGAGGGTATCTAGTTAGGAAAAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAGGTTGCCGCGAGAGCTCGCCGTTCGATGATCAAGGCGAATAGGTTTCAGCCTCAAACTCCTGGAAGAAGATATGTGCAATGGTATGATGAAACAAGAAGTGAGTTCCATAGTAAGAGGCTACTACCAACAAGCAAATCCTATGAAACATCCTTAAATATGAAAGGATTTGATGAGAGCCCCAAGAATGTTGAAATTGATACATACAGGCCACAATCAAGATCAAGGAGAATCACAACAACTACTATGTCTGAGACTCAAGAAGACCACCTTCACTATCAAGCAATCTCAGTTCTTGAATGCAGGCATCCTCCTCAGCATTTGGAATGGTACTCGAACACGGATGAATGTGAGATCGCGACAGCTCGCAGCACGCCTCGTCTGGCGAATGCTCCGGCTACACCGGTGAAGAGTGTTTGTGGAGACTCCTTTAGGCCTTACTGCAATTCCCCTAACTACATGGCCAATACTCAGTCATATAAGGCAAAGGTTAGGTCTCATAGTGCTCCAAAGCAAAGGCCTGAGCCTAAGAAGAGGTTTTCACTCACTGAAATAATGGCAGCAAGAAATAGCACTAGTGGTGTTAGAATGCATTGGTCATCCAAATCACACTCTCAAGATTATTGCAGTTTTGACAGAGTTGAGAGCAAACTGAAATAG 1101 0.4405 MGKASRWLKGLLGLKKEKDSYDNCGSMAASTDKKEKKRWSFAKSAKDGDLTQNASTNYGVRGSDSDSADAWIRSFVRLTSHGRGTLFSGSREKWAALKIQSYFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQVAARARRSMIKANRFQPQTPGRRYVQWYDETRSEFHSKRLLPTSKSYETSLNMKGFDESPKNVEIDTYRPQSRSRRITTTTMSETQEDHLHYQAISVLECRHPPQHLEWYSNTDECEIATARSTPRLANAPATPVKSVCGDSFRPYCNSPNYMANTQSYKAKVRSHSAPKQRPEPKKRFSLTEIMAARNSTSGVRMHWSSKSHSQDYCSFDRVESKLK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00203 366 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Aip08g00203 366 Pfam Protein of unknown function (DUF4005) 272 341 IPR025064 -
Aip08g00203 366 PANTHER IQ-DOMAIN 5-RELATED 1 54 - -
Aip08g00203 366 PANTHER IQ-DOMAIN 5-RELATED 74 350 - -
Aip08g00203 366 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 74 350 - -
Aip08g00203 366 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Aip08g00203 366 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Aip08g00203 366 Pfam IQ calmodulin-binding motif 119 133 IPR000048 GO:0005515
Aip08g00203 366 Gene3D - 89 151 - -
Aip08g00203 366 SMART iq_5 114 135 IPR000048 GO:0005515
Aip08g00203 366 SMART iq_5 91 113 IPR000048 GO:0005515
Aip08g00203 366 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 54 - -
Aip08g00203 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00203 Aip-Chr8 1394472 1395949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00203 1 344 IQD Protein Family AT3G16490 46.113 7.20e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00203 - - gmx:100797686 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00203 08 1394472 1395949 Aip08g00203 08 1394472 1395949 ECH
Aip08g00203 08 1394472 1395949 Aip09g00472 09 4983337 4986744 PCT