Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00183 ATGTCACATCTATTTAAATGTGTGATTCTTTTCATCATGCTGTGTACCACAGCTTCGAGGGAGTTCAAAGTTGGTGATCACTTTGGTTGGCGTGTTCCTGATCCCACTGACACTTCATTCTACACCCATTGGGCTGAAAGAAACAGGTTCCAAGTTGGAGATTCTCTCGTGTTTGAGTACGAGAATGACTCAGTTCTAAGTGTGGAGGAATGGGACTATTTTCACTGCGATGCAAGTAACCCCATCACAGCCTTTGACAATGGCAAGAGCATTCTCAATCTTGATAGCCCTGGTGCCTTCTACTTCATCAGTGGAACCGCTCATCATTGTAGCAGAGGACCCCACTACCTCTGCTGCTTGGCAAgtttgtgttttgcttttcctttgctgtaa 393 0.4249 MSHLFKCVILFIMLCTTASREFKVGDHFGWRVPDPTDTSFYTHWAERNRFQVGDSLVFEYENDSVLSVEEWDYFHCDASNPITAFDNGKSILNLDSPGAFYFISGTAHHCSRGPHYLCCLASLCFAFPLL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00183 130 PANTHER BLUE COPPER PROTEIN 8 113 IPR039391 GO:0009055
Aip08g00183 130 ProSiteProfiles Phytocyanin domain profile. 20 130 IPR003245 GO:0009055
Aip08g00183 130 SUPERFAMILY Cupredoxins 19 116 IPR008972 -
Aip08g00183 130 Pfam Plastocyanin-like domain 37 113 IPR003245 GO:0009055
Aip08g00183 130 Gene3D - 19 119 IPR008972 -
Aip08g00183 130 PANTHER EARLY NODULIN-LIKE PROTEIN 2 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00183 Aip-Chr8 1203016 1203491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00183 7 113 Phytocyanin Superfamily AT1G79800 53.271 1.35e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00183 - - aip:107610303 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00183 08 1203016 1203491 Aip08g00183 08 1203016 1203491 ECH