Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00180 ATGGAGAGAAGGATTCTGAAGATGCTGGACCATCCTTTGTATCGTCATGGAGTTTTGCTCCGGTGGAGACTTGCACTCCCTCCGCCACAAGTTCCCTCGCCGCAAGTCCAAACCGTTCAACCAGACCGGTTCTTCGTGGCCGAACCGGTCTCCGCTCGGTCATGCTCTTTCGTTGGGACGCACGAGTATGTTTCGTCGGAGGTAACAGCCGGTGGATCACACGGCAATGCCGTGGACTGGTGGTCATTCGGGGTATTCATCTACGAGCTATTGAATCGTCGCGATTCCATCACATCCAATCGGTCTCTGCCTTGCACTTGGTTCAGCTTCAGAAATTGTTCAAGGAAGGAGTGGTAG 357 0.535 MERRILKMLDHPLYRHGVLLRWRLALPPPQVPSPQVQTVQPDRFFVAEPVSARSCSFVGTHEYVSSEVTAGGSHGNAVDWWSFGVFIYELLNRRDSITSNRSLPCTWFSFRNCSRKEW 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00180 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00180 118 Pfam Protein kinase domain 54 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00180 118 PANTHER FLIPPASE KINASE 1-RELATED 33 96 - -
Aip08g00180 118 Gene3D Transferase(Phosphotransferase) domain 1 53 93 - -
Aip08g00180 118 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 33 96 - -
Aip08g00180 118 SUPERFAMILY Protein kinase-like (PK-like) 52 95 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00180 Aip-Chr8 1188173 1188641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00180 33 91 AGC Kinase Gene Family AT2G34650 72.881 5.43e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip08g00180 Pkinase 7.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00180 - - lja:Lj4g3v2716940.1 109.383