Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00175 ATGGCTCGCATAGCATTCGGAAGATTCGATGATTCCTTCAGTTTTAGCTCCATCAAGTGCTATATTGCAGAGTTACACTCAACCTTGATCTTTGTTTTTGCTGGTGTTGGTTCTGCCATTGCCTATGATAAGTTGACATCAGGTGCAGCTCTTGATCCTGCTGGGTTGGTAGCAGTTGCTGTTTCCCATGCTTTCGCTCTCTTTGTAGCAGTTGCTGTTAGTGCCAACATCTCTGGTGGCCATGTCAACCCTGCAGTGACTTTTGGCCTAGCTCTTGGTGGCCAGATCACCGTTCTCACCGCTATCTTCTACATAATTTCGCAGCTTCTTGGCTCCATAGCCGCTTGCTTGCTCCTCAAGCTTGTCACTGGAGGCTTGACAATTCCAATCCACAATGTTGGAGCTGGAGTTGGAGCAGGAGAAGGAGTTGTTACTGAGATTATAATCACATTTGGATTGGTGTACACTGTGTATGCAACAGCAGCTGATCCAAAGAAGGGTTCACTGGGAACAATTGCACCCATTGCCATTGGTTTCATTGTAGGTGCCAACATCTTGGCTGCAGGGGCATTCTCTGGCGGCTCCATGAACCCGGCACGCTCCTTTGGACCTGCTGTTATCAGTGGAGACTTCACTAATCACTGGATCTACTGGGTTGGACCACTTATTGGTGGTGCTGTGGCTGGTCTTGTCTATAGCTTTTTTTACATGCCTACTGAGCATGCTCCATTGGCCAGTGATTTTTGA 747 0.4779 MARIAFGRFDDSFSFSSIKCYIAELHSTLIFVFAGVGSAIAYDKLTSGAALDPAGLVAVAVSHAFALFVAVAVSANISGGHVNPAVTFGLALGGQITVLTAIFYIISQLLGSIAACLLLKLVTGGLTIPIHNVGAGVGAGEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGAFSGGSMNPARSFGPAVISGDFTNHWIYWVGPLIGGAVAGLVYSFFYMPTEHAPLASDF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00175 248 SUPERFAMILY Aquaporin-like 13 243 IPR023271 -
Aip08g00175 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Aip08g00175 248 PANTHER MIP PROTEIN 1 248 - -
Aip08g00175 248 Pfam Major intrinsic protein 15 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 Gene3D Glycerol uptake facilitator protein. 2 247 IPR023271 -
Aip08g00175 248 CDD MIP 21 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip08g00175 248 PANTHER AQUAPORIN-8 1 248 IPR034294 -
Aip08g00175 248 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00175 Aip-Chr8 1143582 1145596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00175 1 248 Major Intrinsic Protein MIP AT3G16240 76.000 3.68e-129 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00175 K09873 - rcu:8273814 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00175 08 1143582 1145596 Aip08g00175 08 1143582 1145596 ECH