Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00172 ATGAATACTCTTTTCTTCTTTATCTCCTTTTGCTTATGCATTCAAACCCATGCATCAGCTTCTTCGAATTCTTCCAAATCAAACACACTGTTTCCAAAAGAAGCTCACCCCACAAAATCAGGTTACCTTTCTGTCAGCAAAACCTCTTCTTCCGCCTTCTTCTACACTTTCTATGAAGCTCAGAACTCGACCTTGCCTCTCTCCAAAACCCCGCTTCTCATTTGGCTCCAAGGTGGCCCTGGAAGCTCCTCCATGATTGGCAGCCTCTATGCTGTTGGACCATGGCGTATCACAGAATCCATCACCCTTGAACCCAACCCTGGTGCTTGGAACAAGTTCTTTGGCGTTCTCTTTCTTGATAACCCCATTGGCACTGGATTCAGTATAGCCTCATCACCGCAAGAGATCCCAACGAATCAAGAAGGTATTGCCAAACACCTTTATGTTGCTCTTACAAGGTTTCTTCAACTTGATCCTGTTTACAAACACCGCCCTATTTATATTGTTGGCCAAAGTTATGGAGGAAAGTATGCGTCTACAACTGGAAATTACATATTGAAAAGAAATGCACAGTTGCATGCTTCTAAAAGAGTGAATCTTGTTGGTGTGGCTATTGGGAATGGAATAATTGAGGCAGTGACCCAATCACGCACGCATCCGGCTAATGCTTATTATGAGGGTCTAATCAATGAGAGGCAAAAGAGTGAGTTGGAGAAGGATCAACTGGAAGTAGTTAGGTTGGCACAGATTCAGCATTGGAGTGAAGCAACGATTGCATGGCGAAGACTCCAGGGGAAGTTGCAAAACATGTCAGGGCTGGCTACTTTGTATGATTACACAAGGAAAGATCATCCTTATCACTATCAAGATTGGGTTACTCAATTCTTGAATATAGCTGAAGTGAAGAAGGCATTGGGCGTGAACGAACCTCAAGTGTTTAAATCGAGCAGCAGTAATGTTGGGGAAGCATTGCTAGGAGATATAATGAAGAGTGTGAAGTTTATGGTGGAGGGGTTGTTGAAGAGCAACACTATTAGGGTGTTGTTGTACCAAGGTCAACTCGATTTGGTTGCTGGTCCGGTTCAAACTGCGGCATGGGTGAATACTATGAAATGGGAAGGGATTGAGGAGTATGTGAATGCAGAGAGGAAGATATGGAGGGTGAATGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACCAATGTTGTTGTCTTGGGTGGTGGCCATCTTATGCCTGCTGACCAGCCTGTTAATGCTCAGACAATGATACAAGATTGGGTCTTGCAAAGGGGTTTGTATCAAAATGTGTAA 1320 0.4402 MNTLFFFISFCLCIQTHASASSNSSKSNTLFPKEAHPTKSGYLSVSKTSSSAFFYTFYEAQNSTLPLSKTPLLIWLQGGPGSSSMIGSLYAVGPWRITESITLEPNPGAWNKFFGVLFLDNPIGTGFSIASSPQEIPTNQEGIAKHLYVALTRFLQLDPVYKHRPIYIVGQSYGGKYASTTGNYILKRNAQLHASKRVNLVGVAIGNGIIEAVTQSRTHPANAYYEGLINERQKSELEKDQLEVVRLAQIQHWSEATIAWRRLQGKLQNMSGLATLYDYTRKDHPYHYQDWVTQFLNIAEVKKALGVNEPQVFKSSSSNVGEALLGDIMKSVKFMVEGLLKSNTIRVLLYQGQLDLVAGPVQTAAWVNTMKWEGIEEYVNAERKIWRVNGELAGYVQQWKSLTNVVVLGGGHLMPADQPVNAQTMIQDWVLQRGLYQNV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00172 439 PANTHER CARBOXYPEPTIDASE 21 433 - -
Aip08g00172 439 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 433 IPR001563 GO:0004185|GO:0006508
Aip08g00172 439 SUPERFAMILY alpha/beta-Hydrolases 37 431 IPR029058 -
Aip08g00172 439 Coils Coil 225 245 - -
Aip08g00172 439 Gene3D alpha/beta hydrolase 15 437 IPR029058 -
Aip08g00172 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Aip08g00172 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
Aip08g00172 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 179 IPR001563 GO:0004185|GO:0006508
Aip08g00172 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Aip08g00172 439 Pfam Serine carboxypeptidase 37 430 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00172 Aip-Chr8 1126272 1127591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00172 297 430 Calmodulin-binding Proteins AT2G22960 24.444 5.49e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00172 K09645 - gmx:102663282 575.089