Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00165 ATGATGGGTGGGAACCCTAACCCTAACTGGTGGAATAATATCCCTCAACATCATCATCATCAGTATGAAGATGACTATTCACACATCAACATGATGAACATGCTAGATTTCACTTATAGCAAGAAGCTACCACCATCACCACCAGCATTATCCTACAAGTGTAATAGTAGTAGAATTAGCACTAACAAGAACAAGAACAAGAAAGGTAGGGTTTCAAGCCAACAACATCTCATCAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATCACATCCCTTCATCAACTTGTTTCTCCATTTGGAAAGACTGACACAGCTTCCGTTCTATTGGAAGCAATTGGATATATAGGATTCCTTCACTCTCAAATTCAGACACTGACCTCTCCTTATTTGGACAACACCAATAATCCAAACTCTGTAACTGATGGAGAAGATAGTAAGAATAAGGAAAAGGACTTAAAGAGTAGAGGCTTGTGCTTGGTTCCAATATCATGCACCCAACATGTTGGAACTCAAGATTATCATCATGCTGCCGATTACTGGCCATCACCATTTGCCACCGGATTTTAA 567 0.4004 MMGGNPNPNWWNNIPQHHHHQYEDDYSHINMMNMLDFTYSKKLPPSPPALSYKCNSSRISTNKNKNKKGRVSSQQHLIKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIGFLHSQIQTLTSPYLDNTNNPNSVTDGEDSKNKEKDLKSRGLCLVPISCTQHVGTQDYHHAADYWPSPFATGF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00165 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 118 IPR011598 GO:0046983
Aip08g00165 188 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 173 - -
Aip08g00165 188 CDD bHLH_AtbHLH_like 79 125 IPR045239 -
Aip08g00165 188 Gene3D - 62 136 IPR036638 GO:0046983
Aip08g00165 188 PANTHER TRANSCRIPTION FACTOR BHLH68 33 173 - -
Aip08g00165 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 129 IPR036638 GO:0046983
Aip08g00165 188 MobiDBLite consensus disorder prediction 128 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00165 Aip-Chr8 1043911 1044927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00165 63 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 49.635 1.42e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00165 - - ahf:112703662 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00165 08 1043911 1044927 Aip08g00165 08 1043911 1044927 ECH