Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00148 ATGATTAAAAGAATTCTTCACTCTTCCTTGTTATTCCTTCTACTGCTTGAAAACTCTGTAGCAGATTCAAACAATGATATTGCCATTTACTGGGGTCAAAATGATGGAGAAGGTACCTTAACAGAAACATGTTCAACAGGAAAATACTCCTATGTGATCTTAGCCTTCTTGAACAATTTTGGAAATGGAACAGTACCTACCATTAATCTTGCAAGTCACTGTGACCCTCTTATGGATGGTTGCAGAACATTGAGCACAGACATAAAGAATTGCCAAATGCAAGGGATCAAAGTGTTGCTCTCAATTGGAGGAGCAGATGGGAATTACAGCCTAGCTTCCTCTGATGATGCCAAGAATGTTTCTGATTACTTGTGGAACAGTTTCTTGGGTGGCAAGTCATCTCCCTCGTCGCGTCCGTTAGGGGATGCTGTGTTAGATGGAATTGACTTTGACATTGAGATTTCGCCACCAGAACACTGGGAGGAGCTCGCGCGCTACCTCGAGTCGCATAGCACGCAGGCAAGAAAGGTTTACCTAAGTGCAGCACCTCAGTGTCCATTTCCTGATGCTGAACTTGGCATTGCACTTTCCACAGAGATTTTTGACTATGTTTGGATCCAGTTCTACAACAATCCTGGTTGTGAATATGAAGATGGTGATGTCAACAATTTGTTGAACTCTTGGAATCAATGGACTAAATCTGTGAAAAATGGGAAAGTCTTTTTGGGATTACCGGCGTCTCGTGAAGCTGCAAGCAATGGCTATGTTCCAGTTAATGTGTTGGTAACAGACATTCTACCTGTCATAAGGAAGTCACCTAACTATGGAGGTGTGATGCTGTGGACAACATACTATGATAAACAAACTGGATACAGCAACTACATCAGAAGTTTTTCTTGCACACAACAGAACAATACTGAATGCAGAGGAAATGATGAACACAAAGCAAACAAATGGTGGATATGGCTTATCGTTGGGGTTGGAGCAGCATTTGCAATAACATGTTTTATCCTCTGCTTATGTTGTGTCTCAAGGAGAAAAGATAAATCACAAGTGGATGGAAAATTGGACAAAAAGATATCATTTACTGAACCCAATGGAGTGAATCCAAACAAAACAGAAAACATCAAACTAGAAAAAAGGACAAGTAATGAGGTGAAAGTATTCAGTTTTGAAAGCAACATTGCAGCCTCAAACAATTTCTCATCCATTAATAAGGTGGGAGAGGGTGATTTTGGTCCTGTTTATAAGCAGCAGAATTCAAGAGCCGGCTCCGCTATCACCATCCTTCGAAACGTGGTAGCCAAGGAAGGACTAACTTCTCTTTACCGCGGCATGGCTGCACCTTTGGCTTCTGTCACTTTTCAGAACGCTATGGTTTTCCAAAGTTATGCAGTGTTGTCAAGAGCATTTTGCTCACCAGTTTCCTTTAATGACCCTCCTTCTCTTAAGGCTGTTGCTTTAGGAGGAGTTGGTACCGGTGCTCTCCAAAGCATACTGCTTTCCCCTATTGAGTTGGTGAAAATTCGCCTTCAGGTGCGCGACACAAGCCAATTATCTGAAGCCGAAAAGGGTCCCATAAAGGTTGCTAAGAACATATTGAAAACCGAAGGTTTCCGCGGAATTTACAGAGGACTCAGCATTACTGTGTTGAGAGATGCACCTGCACATGGTTTGTACTTCTGGACATACGAATATGCAAGGGAACTACTTCACCCTGGCTGCAGAAAAAGTTCTGAGGAAAGCTTGAATACTATGCTGGTAGCAGGGGGATTAGCTGGGGTATCTAGCTGGATCTTCAGCTACCCTTTAGATGTTATAAAGACAAGAATCCAGGCTCAAACACTTCATTCTTCTAAATACAATGGTATCCTAGATTGTCTCCAAAAGAGCATAAAAGAGGAAGGCTATGTTGTGTTGTGGCGAGGTTTAGGAACAGCTGTTGCTAGAGCTTTCATAGTGAATGGTGCTGTGTTTTCAGCTTATGAGATTACTCTCAGGTGCTTCTTTAATAGTAACTGA 2022 0.4209 MIKRILHSSLLFLLLLENSVADSNNDIAIYWGQNDGEGTLTETCSTGKYSYVILAFLNNFGNGTVPTINLASHCDPLMDGCRTLSTDIKNCQMQGIKVLLSIGGADGNYSLASSDDAKNVSDYLWNSFLGGKSSPSSRPLGDAVLDGIDFDIEISPPEHWEELARYLESHSTQARKVYLSAAPQCPFPDAELGIALSTEIFDYVWIQFYNNPGCEYEDGDVNNLLNSWNQWTKSVKNGKVFLGLPASREAASNGYVPVNVLVTDILPVIRKSPNYGGVMLWTTYYDKQTGYSNYIRSFSCTQQNNTECRGNDEHKANKWWIWLIVGVGAAFAITCFILCLCCVSRRKDKSQVDGKLDKKISFTEPNGVNPNKTENIKLEKRTSNEVKVFSFESNIAASNNFSSINKVGEGDFGPVYKQQNSRAGSAITILRNVVAKEGLTSLYRGMAAPLASVTFQNAMVFQSYAVLSRAFCSPVSFNDPPSLKAVALGGVGTGALQSILLSPIELVKIRLQVRDTSQLSEAEKGPIKVAKNILKTEGFRGIYRGLSITVLRDAPAHGLYFWTYEYARELLHPGCRKSSEESLNTMLVAGGLAGVSSWIFSYPLDVIKTRIQAQTLHSSKYNGILDCLQKSIKEEGYVVLWRGLGTAVARAFIVNGAVFSAYEITLRCFFNSN 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00148 673 SUPERFAMILY (Trans)glycosidases 23 295 IPR017853 -
Aip08g00148 673 Gene3D Glycosidases 25 299 - -
Aip08g00148 673 PANTHER ENDOCHITINASE 7 297 - -
Aip08g00148 673 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 25 302 IPR001223 GO:0005975
Aip08g00148 673 ProSiteProfiles Solute carrier (Solcar) repeat profile. 581 668 IPR018108 -
Aip08g00148 673 SUPERFAMILY Mitochondrial carrier 418 663 IPR023395 -
Aip08g00148 673 Pfam Glycosyl hydrolases family 18 27 295 IPR001223 GO:0005975
Aip08g00148 673 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Aip08g00148 673 ProSiteProfiles Solute carrier (Solcar) repeat profile. 481 570 IPR018108 -
Aip08g00148 673 PANTHER ACIDIC ENDOCHITINASE 7 297 - -
Aip08g00148 673 CDD GH18_hevamine_XipI_class_III 25 297 IPR045321 -
Aip08g00148 673 Pfam Mitochondrial carrier protein 419 471 IPR018108 -
Aip08g00148 673 Pfam Mitochondrial carrier protein 487 572 IPR018108 -
Aip08g00148 673 Pfam Mitochondrial carrier protein 585 672 IPR018108 -
Aip08g00148 673 Gene3D Mitochondrial carrier domain 396 672 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00148 Aip-Chr8 949435 953459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00148 415 673 Antiporters AT1G79900 65.251 9.86e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00148 K01183 - nau:109210302 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00148 08 949435 953459 Aip08g00148 08 949435 953459 ECH