Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00141 ATGCCGAAGAAGGTTCAGAAAACCCTTCAAGACTACCTTGCCAAGGTTAAAAGCCCTCGCCATTCATCACAAAACCAGTCACAGAAACCGTTTAACTCGTTTTCATTTTTCTCCTCCAAAAACTGGATCATCGCAGCCTGCAAGCACCCAAGGACACCTTCTTTTGCCTTTGATGATTCTCACGGTGGTGGTCGCGGCGGCAACAACAGCAACAACCACAAAGACGATGCGGCCACCCTAGCCGACGTTGATCGCTTCCTCTACGAGAATTTCAAGTCTCTGTATTTCAGAGAAGGTGAAGAAAACGAAGACTACAACACCAGCAACAAAAGAGTAGACTCATCGGGACAGATCCAACACGATCAAGGTGCAAAACTAATACCGATGTTCGATTCATTGAGGTTGGCGGAAACACCACGCGACCTCGGTGGATCGAACAGATTCTTCGTGAAAACTGGTTTGTCGGGATCACTGTTCCTGGACGATGGTTTAACACGAAGTGGTGATGATCATCACTATGCAGGATCGAGCTCAAACTCAACTGTAACGAACACCGATTCATCCTCGAATGATGAGAATCATCATGAGAATGAGAAGCTCCCTGAGAATTGCATCGCTCTGCTGAGAAGCAGTTCGAGCCCGTACGAGGATTTTCGGCGCTCCATGCAGGACGTGGTGGAAGCGAGGTTCAAAAGCCATGGAAAGGTAATTGATTGGGAGTTCATGGAGGAGCTATTACTTTCTTACCTTAGGCTAAACGAGAAGAAGTCGCACAAGTTCATACTCAATGCCTTCGTGGATGTCACCGCTGCCATGCGTCCGAATTCTGAAATGACGGATCCCCATCCCCGGAGCGTTCGAACTGTTAGGTTTGGTAGGGGAGTAACGAAGAAGACCAAAGAATTTACCTTAGAATTTGGGTCCTCTAATTCATGA 936 0.4744 MPKKVQKTLQDYLAKVKSPRHSSQNQSQKPFNSFSFFSSKNWIIAACKHPRTPSFAFDDSHGGGRGGNNSNNHKDDAATLADVDRFLYENFKSLYFREGEENEDYNTSNKRVDSSGQIQHDQGAKLIPMFDSLRLAETPRDLGGSNRFFVKTGLSGSLFLDDGLTRSGDDHHYAGSSSNSTVTNTDSSSNDENHHENEKLPENCIALLRSSSSPYEDFRRSMQDVVEARFKSHGKVIDWEFMEELLLSYLRLNEKKSHKFILNAFVDVTAAMRPNSEMTDPHPRSVRTVRFGRGVTKKTKEFTLEFGSSNS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00141 311 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 205 272 IPR006458 -
Aip08g00141 311 Pfam Transcriptional repressor, ovate 211 271 IPR006458 -
Aip08g00141 311 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 281 - -
Aip08g00141 311 MobiDBLite consensus disorder prediction 100 119 - -
Aip08g00141 311 MobiDBLite consensus disorder prediction 171 188 - -
Aip08g00141 311 ProSiteProfiles OVATE domain profile. 207 271 IPR006458 -
Aip08g00141 311 MobiDBLite consensus disorder prediction 170 199 - -
Aip08g00141 311 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 281 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00141 Aip-Chr8 913862 915460 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip08g00141 Ovate 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00141 - - adu:107459577 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00141 08 913862 915460 Aip08g00141 08 913862 915460 ECH
Aip08g00141 08 913862 915460 Aip09g00323 09 3083514 3084431 PCT