Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00138 ATGAGCGTGGTTGGTTTTGATTTTGGTAATGAGAGCTGCATTGTTGCCGTTGCAAGGCAGAGGGGGATTGATGTCGTGCTCAATGATGAGTCCAAGCGTGAAACTCCTGCAGTTGTATGCTTTGGTGACAAACAACGGTTCATTGGGACAGCTGGGGCTGCATCTACGATGATGAACCCGAAGAATTCAATCTCACAGATAAAGCGGTTAATCGGCAGACAATTTTCGGATCCTGAACTGCAACGAGATCTGAAGTCATTGCCCTTCACAGTTACTGAAGGGCCTGATGGGTTTCCATTAATCCATGCACGATACTTGGGTGAATCTAAAGCATTTACACCTACCCAAGTCATGGCAATGGTGTTGTCAAATCTTAAAGAGATTGCCGAGAAAAACCTAAATGCAGCTGTAGTTGATTGTTGCATTGGTATTCCAGTTTATTTTACTGATCTTCAAAGGAGGGCAGTCATGGATGCTGCTACTATTGCTGGTTTGCATCCACTTCGTCTGCTTCATGAAACAACAGCAACTGCTTTGGCCTATGGAATTTACAAAACAGATCTTCCTGAAAGTGATACACTGAATGTTGCATTTGTTGATGTTGGGCATGCTAGCATGCAAGTCTGCATTGCTGGTTTTAAAAAAGGGCAGCTGAAAGTGTTGGCTCATTCATATGACAGGTCTTTAGGGGGTAGGGATTTTGACGAAGTTCTGTTTCATCACTTTGCTGCCAAATTTAAAGAGGAATATAAAATTGATGTTTTACAGAATGCAAGAGCTTCATTAAGGCTGAGGGCTGCATGTGAGAAGCTCAAGAAGGTACTTAGTGCAAATCCAGAAGCACCTCTGAATATCGAGTGCTTAATGGATGAGAAGGATGTCAGGGGCTTTATCAAACGTGAGGAGTTTGAGCAACTAAGTATTCCAATTTTGGAACGTGTGAAGAGACCTTTGGAGAAGGCACTTGCAGAAGCAGGACTTACAGTTGAGAATATACACATGGTCGAGATAGTTGGTTCAGGTTCTAGAGTACCAGCCATAAACAAAATCTTAACAGACTTTTTCAAAAAGGATCCTAGAAGGACAATGAATGCTAGTGAATGTGTAGCCAGGGGATGTGCATTGCAGTGTGCAATTCTTAGTCCAACATTTAAAGTAAGAGAGTTCCAGGTCAATGAAAGCTTTCCCTTCTCAATCTCTCTTTCGTGGAAAGGTTCTGGTCCAGATGCACAAGATAGTGGACCAGATAGTAAGCAAAGCACCATTGTTTTCCCCAAGGGAAATCCTATACCAAGTATCAAGGCTTTGACATTTTATAGGCCAGGGACCTTTACTGTTGAAGTACAATATGATGATGTCAGTGAGTTGCAAATACCTGCTAAGATCAGCACATATACTATTGGCCCATTTCAATCTACCAAAGTTGAAAAGGCTAAAATTAAAGTTAGAGTGCGACTGAATCTACATGGAATTGTATCTGTTGAGTCTGCAACTCTCATTGAGGAGGAAGAGATTGAGATTCCAGTTTCCAAAGATACCAAGATGGAAACTGATGAAGCAGCTGCTGCACCTCCTAGCTCGACTGATAATGATGTTAATATGCAAGATGCCAAGACAACAACAGATGCCAATGCAACCACAGGTGCTGATGCCGCAGGTGAAAATGGTGTTCCGGAGGCAGGAGACAAGCCTGTTCAGATGGAGACTGATAACAAGGTTGAGGCTCCAAAGAAGAAAGTAAAGAAAACTACCATTCCTGTGGCAGAGGTGGTTTATGGAGCACTGGCACCTGTGGATGTCCAGAAGGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAGGACAAGAAAAATGCTGTGGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACCGACTCGGAGAAGGAAGCTTTTACTGCTAAACTTCAGGAGGTGGAAGACTGGTTATACGAGGATGGTGAAGATGAAACCAAAGGTGTATACATTGCCAAACTCGATGAACTTAAGAAGCAAGGAGATCCGGTTGAAGAACGATACAGAGAATACACGGAGAGGGGTGCAGTAATTGATCAGCTCATCTACTGTATAAATAGTTACAGAGAAGCTGCAATGTCAAGTGATCCCAAGTTTGATCACATCGAACTTGAGGAGAAACAGAAGGTCCTAAATGAATGTGTAGAGGCTGAGAACTGGCTTCGGGAGAAGCAGCAGCAGCAGGACATTCTTCCAAAATATGCAACCCCTGTGCTGCTGTCAGCTGAAATAAGAAAGAAAGCTGAGGCCGTTGATAGGTTCTGTAAGCCAATAATGACTAAACCCAGACCGGCAAAGCCAGCAACACCAGAAGCACCAGCAACTCCCCCACCTCAGGGTGGCGAACAGCAGCAACCACCGGAGAATGCCAATGCCAGTGCCAGTCCAAATCAGAATGCAGGGGACAGTGGGAACAATCAGGCCCCGCCGGAGGCCGGAGAACCAATGGAGACTGATAAATCGGAGAACACAAGCTCTGCGTAA 2565 0.4402 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFTVTEGPDGFPLIHARYLGESKAFTPTQVMAMVLSNLKEIAEKNLNAAVVDCCIGIPVYFTDLQRRAVMDAATIAGLHPLRLLHETTATALAYGIYKTDLPESDTLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVLQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKREEFEQLSIPILERVKRPLEKALAEAGLTVENIHMVEIVGSGSRVPAINKILTDFFKKDPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQDSGPDSKQSTIVFPKGNPIPSIKALTFYRPGTFTVEVQYDDVSELQIPAKISTYTIGPFQSTKVEKAKIKVRVRLNLHGIVSVESATLIEEEEIEIPVSKDTKMETDEAAAAPPSSTDNDVNMQDAKTTTDANATTGADAAGENGVPEAGDKPVQMETDNKVEAPKKKVKKTTIPVAEVVYGALAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTDSEKEAFTAKLQEVEDWLYEDGEDETKGVYIAKLDELKKQGDPVEERYREYTERGAVIDQLIYCINSYREAAMSSDPKFDHIELEEKQKVLNECVEAENWLREKQQQQDILPKYATPVLLSAEIRKKAEAVDRFCKPIMTKPRPAKPATPEAPATPPPQGGEQQQPPENANASASPNQNAGDSGNNQAPPEAGEPMETDKSENTSSA 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00138 854 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Aip08g00138 854 Gene3D - 186 360 - -
Aip08g00138 854 CDD HSPA4_like_NDB 2 381 - -
Aip08g00138 854 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 595 695 IPR029048 -
Aip08g00138 854 MobiDBLite consensus disorder prediction 782 854 - -
Aip08g00138 854 PRINTS 70kDa heat shock protein signature 2 15 - -
Aip08g00138 854 PRINTS 70kDa heat shock protein signature 30 42 - -
Aip08g00138 854 PRINTS 70kDa heat shock protein signature 140 160 - -
Aip08g00138 854 PRINTS 70kDa heat shock protein signature 332 348 - -
Aip08g00138 854 PRINTS 70kDa heat shock protein signature 363 383 - -
Aip08g00138 854 PRINTS 70kDa heat shock protein signature 477 493 - -
Aip08g00138 854 MobiDBLite consensus disorder prediction 790 810 - -
Aip08g00138 854 Gene3D - 38 113 - -
Aip08g00138 854 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Aip08g00138 854 MobiDBLite consensus disorder prediction 523 548 - -
Aip08g00138 854 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Aip08g00138 854 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Aip08g00138 854 Gene3D - 597 702 IPR029048 -
Aip08g00138 854 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 708 793 IPR029048 -
Aip08g00138 854 PANTHER HSC70CB, ISOFORM G-RELATED 1 853 - -
Aip08g00138 854 MobiDBLite consensus disorder prediction 511 564 - -
Aip08g00138 854 MobiDBLite consensus disorder prediction 811 833 - -
Aip08g00138 854 Gene3D - 5 374 - -
Aip08g00138 854 Gene3D Actin; Chain A, domain 4 230 313 - -
Aip08g00138 854 Gene3D - 703 789 IPR029048 -
Aip08g00138 854 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 853 - -
Aip08g00138 854 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 628 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00138 Aip-Chr8 892725 898308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00138 4 438 Calmodulin-binding Proteins AT1G16030 35.616 6.18e-88 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00138 K09489 - gmx:100778196 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00138 08 892725 898308 Aip08g00138 08 892725 898308 ECH
Aip08g00138 08 892725 898308 Aip09g00320 09 3060157 3064134 PCT