Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00137 ATGGATGACATTGAGGATGATGCAAGGTATCCCCCAAACCATTATAGCGATAATCATAGCCAAGTTTATGATTATCAGGAACTTGACATGAGGGGTTCTTCATATTCTCAGCCAGTTCCAAATGAATATCCACAAGATAATAATGATGTGGATGAAGAAGATGAGGAGCAGTTAGGAGAGGATGAAGATGATGGTATAGATCAAAGAAATGGTTTTAGGATTTCCCAAAAGGATAAGGATAACAATGATGATGAGGAAGGTGACACAGATGGTGATGGCAATGAGAATGATGATGATAATAATGAAGGTAATGATGATAACGATAACAGTCATGGCAATAAGATTGAAGATGGTTTGGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGGTATCTACCTATGAACTTGCACCTCGGGTGCCAGCCCCATCAACTGTGGCTACCTCATCTCCTAAACCATCTTCAGGTGGTAGGAATTCACTTACCGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCTTGGGGTGACCGGTTTCTTCAACGCGAAAGGAAGAGTCTTCGCTCTGATGAATGGCATGAAGTTGCAGCCGAAGTATCAAAGGTTTCAAAAATTGATAGGACAGATACTCAGTGTAGAAATCGTATTGATACATTGAAGAAAAAATACAAAAAGGAGATCATGAAGTTTCCTGCAATGGGTGTTGGAAGTAGCAAATGGCTTTATTTCGAAAGGATGAATAAGCTAATGTCTCCTCCACCACAGCAAACAAGTCTCTCCTGTGAAATGCAATCACAAAAGCATGCCGTTATTAACTCAAGAGTTAATTTGAACCATCCAAATGGAGTAGATAAGACGAGGAATAGTCCTGAGACTACAGAATCTACTAGCGAAGACGGTTCAATTGGGGCTCGTGGAAAGAAAAGGAAGAAAAGAAGATGCAATGATGGAGCTTGTTCATTCAGATTGCTAGCTGATTCCATTCATAAGTTCAGTAAGATATACGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGGTGGAGCTGGAAAGGATGAGGATGGATTTGCATAAGGAATTGGAGACACAGAAAAGGCAGATTTTGGAGAGAATGCAGAGTAAGATTTGGAAACTAGAGCAGGGAGATGACGAGAATGATGATTCTGCTGAAAATGGTATGTGA 1188 0.4032 MDDIEDDARYPPNHYSDNHSQVYDYQELDMRGSSYSQPVPNEYPQDNNDVDEEDEEQLGEDEDDGIDQRNGFRISQKDKDNNDDEEGDTDGDGNENDDDNNEGNDDNDNSHGNKIEDGLEWHPKKQKLKSLVSTYELAPRVPAPSTVATSSPKPSSGGRNSLTDWTEHETFVLLDAWGDRFLQRERKSLRSDEWHEVAAEVSKVSKIDRTDTQCRNRIDTLKKKYKKEIMKFPAMGVGSSKWLYFERMNKLMSPPPQQTSLSCEMQSQKHAVINSRVNLNHPNGVDKTRNSPETTESTSEDGSIGARGKKRKKRRCNDGACSFRLLADSIHKFSKIYEKIENSKRQQMVELERMRMDLHKELETQKRQILERMQSKIWKLEQGDDENDDSAENGM 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00137 395 Pfam Myb/SANT-like DNA-binding domain 164 251 IPR044822 -
Aip08g00137 395 MobiDBLite consensus disorder prediction 46 63 - -
Aip08g00137 395 Coils Coil 337 368 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 278 302 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 83 104 - -
Aip08g00137 395 PANTHER OS01G0718900 PROTEIN 52 393 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 144 163 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 105 122 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 141 163 - -
Aip08g00137 395 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 52 393 IPR044823 -
Aip08g00137 395 Gene3D - 165 227 - -
Aip08g00137 395 ProSiteProfiles Myb-like domain profile. 165 222 IPR001005 -
Aip08g00137 395 MobiDBLite consensus disorder prediction 278 313 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 1 122 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 64 82 - -
Aip08g00137 395 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00137 Aip-Chr8 890242 892264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00137 312 382 Trihelix Transcription Factor Family AT3G14180 41.667 9.14e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip08g00137 Myb_DNA-bind_4 6.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00137 - - ahf:112703693 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00137 08 890242 892264 Aip08g00137 08 890242 892264 ECH