Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00132 ATGGGTGTGAACTCCAACAGAGTTGAGCACTTCGATTCCCATAATGGCCAAACCACCACCACCACCATCAAAATCTCAATGCCATCATCAATGCCACCATCCCTTGAAATCCACAGAGTACAGCTTCCACCTGAGAGAACCACTCTCCAGAAACTCAGGCAAAGACTCTCTGAAATCTTCTTCCCCGACGACCCTCTCCACCGCTTCAAGAATCAACCATGCTTCATGAAGCTCCTCTTGGCTCTTCAGTACTTCTTCCCCATTTTCCACTGGGCCCCCACCTACACCATTTCCCTTCTCCGCTCCGACACCATCTCCGGCCTCACCATTGCCAGCCTCGCCATCCCTCAGGGAATAAGTTATGCAAAGCTTGCAAACCTGCCACCTATTGTTGGATTATATTCAAGCTTTGTGCCACCATTGATATATTCACTGCTTGGGAGTTCTAGACATCTTGGTGTTGGACCGGTTTCAATTGCGTCTTTGGTTATGGGATCAATGCTTAGTGAGCAAGTTTCGTGCACGCAGAATCCAATTCTGTATCTGAAGCTGGCTTTCACTGCCACTTTCTTTGCTGGTTTATTTCAAGCTTCACTCGGTATATTAAGGTTAGGATTTGTGATTGATTTTCTATCCAAGGCAACGCTGTTGGGATTCATGGCGGGTGCAGCCATCATAGTTTCTCTGCAGCAGCTGAAAGGGTTGCTCGGAATAGTGCACTTCACCAACAAGATGCAAATAATTCCGGTTCTTCAATCTGTTTTTAAGCAAAGACACGAGTGGTCATGGCAAACAATTGTACTCGGATTTGGCTTCTTGGCCTTCTTGCTGATAACAAGACACATTAGCTTGAGGAAACCAAAACTATTTTGGGTTTCAGCAGCTGCTCCCTTGACATCAGTTATTGTGTCAACTATTCTAGTCTTTCTTCTCAGACACAAGGCTCATCAAATTGCAATTATTGGGAACTTACCGAAGGGTCTTAATCCACCATCTTCAAACATGTTATTCTTCAATGGCGCTTACTTGGCTCTTGCTATCAAAACTGGCATAGTCACAGGACTCTTATCTCTCACAGAAGGAATTGCAGTAGGTAGAACATTTGCATCACTGAAGAATTACCAGGTTGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAATATAGCTGGTTCATGTTCTTCATGCTATGTCACAACAGGGTCCTTTTCTCGATCCGCTGTTAACTATAACGCTGGAGCACAAACAGCAGTTTCAAACATAATCATGGCTGCGGCAGTTCTTGTTACCCTTCTGTTTCTCATGCCACTCTTCTACTATACCCCAAATGTTGTCTTAGCAGCCATTATCATCACTGCAGTGATTGGCCTGATAGATTATCAAGGTGCATATAAGCTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGTGTGTGCTCCTTTTTCGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTCGGCATAGCGGTTGCAATATCAGTCTTCAAGATTCTGCTTCATGTTTCTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTCCACAACGTAAACCAATACAAAGAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCCAATTCAACTTACCTTCAAGAAAGGATCCTGAGATGGGTTCGCGAAGAGGAAGAGTGTACAAAAGTAAATAACAAAAGTTCATTGAAGTGCATAATTTTAGACATGACAGCTGTAACAGCCATAGACACAAGTGGCCTTGACACATTATGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTTGTATTAGCCAATCCTGTTGGGAGTGTGATGGAAAAGTTACATACATCAACAGTTTTGGATTCTTTTGGATTGAAAGGTGTTTATCTCACGAGCTTGAGGAAACCAAAACTATTTTGGGTTTCAGCAGCTGCTCCCTTGACAACAGTTATTCTGTCAACTATTCTAGTCTTTCTTCTGAGAGACAAGGCTCATCAAATTGCAATTATTGAGAACTTACCAAAGGGTCTTAACAACCAGCAAGACAATGCTCTCTCTTGA 2106 0.4288 MGVNSNRVEHFDSHNGQTTTTTIKISMPSSMPPSLEIHRVQLPPERTTLQKLRQRLSEIFFPDDPLHRFKNQPCFMKLLLALQYFFPIFHWAPTYTISLLRSDTISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEQVSCTQNPILYLKLAFTATFFAGLFQASLGILRLGFVIDFLSKATLLGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLQSVFKQRHEWSWQTIVLGFGFLAFLLITRHISLRKPKLFWVSAAAPLTSVIVSTILVFLLRHKAHQIAIIGNLPKGLNPPSSNMLFFNGAYLALAIKTGIVTGLLSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQGAYKLWKVDKLDFLACVCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTQIFHNVNQYKEALRVPSFLILAVESPIYFANSTYLQERILRWVREEEECTKVNNKSSLKCIILDMTAVTAIDTSGLDTLCELRKMLEKRSLQLVLANPVGSVMEKLHTSTVLDSFGLKGVYLTSLRKPKLFWVSAAAPLTTVILSTILVFLLRDKAHQIAIIENLPKGLNNQQDNALS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00132 701 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Aip08g00132 701 Pfam Sulfate permease family 100 479 IPR011547 GO:0016021
Aip08g00132 701 PANTHER SULFATE TRANSPORTER 24 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip08g00132 701 TIGRFAM sulP: sulfate permease 87 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip08g00132 701 SUPERFAMILY SpoIIaa-like 537 639 IPR036513 -
Aip08g00132 701 ProSiteProfiles Caspase family p10 domain profile. 49 87 IPR002138 GO:0004197|GO:0006508
Aip08g00132 701 Gene3D STAS domain 511 649 IPR036513 -
Aip08g00132 701 ProSiteProfiles STAS domain profile. 531 629 IPR002645 -
Aip08g00132 701 PANTHER SULFATE TRANSPORTER 647 700 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip08g00132 701 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 646 - -
Aip08g00132 701 PANTHER SLC26A/SULP TRANSPORTER-RELATED 647 700 - -
Aip08g00132 701 Pfam STAS domain 532 643 IPR002645 -
Aip08g00132 701 CDD STAS_SulP_like_sulfate_transporter 532 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00132 Aip-Chr8 871939 876910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00132 632 700 Inorganic Solute Cotransporters AT3G15990 50.685 1.22e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00132 K17471 - gmx:100812617 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00132 08 871939 876910 Aip08g00132 08 871939 876910 ECH
Aip08g00132 08 871939 876910 Aip09g00313 09 3024009 3028281 PCT