Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00121 ATGAAGAAAGAAAATAATGTAACCAGGAACGTTGGAGACCTCCCTCGTCGATTGACTCGAGCTCAAGCTGCTGCATTTCTTGCATCTGGGCAATTGCCTCCTTCAAAGGGGGTATCACAACAAAAAGAGAAGCAGCTTGTAAAAGGCAATCCAAAAAGAGCAGTTTCGGATAATGCATGCCTTCCACGTAAAAAGAGGGCTGCTCTTCAGGATGTGTCTAACATTTTCTGTGAAACTAAAGGCAAGGGCTGTTTGAATGCACCTAAAATTCAGTCTAAGAAAGGCAAGCTGGATAAGGCTGGTCCAAGTGGTGTTTCCAAAGTACTTAAAGAGAAGAGTTTGCCCCACTCAGGGCTTAGACCGGAAGATGCTACGTGCTCAGTTAATAACGCAAACAATGCACTTCTTCTTTTGATTTCTCAAAAGAAAGATGTACAAATGGCTGCAGCCGAGAAGAGTGGCGTTTATGAACTTCTAAATGTATTAAAGGGACCAGATATCACTGACATTGATGCAGATTTTGAAGATCCCCAATTGTGCAGCTTCTATGCGACTGATATCTACAAAAACTTGCGTATTGCTGAGCTATCAAGAAGGCCTTATCCTAACTACATGGAAACAGTACAGCAAGATATAACACAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTCTCTGAGGAGTATAAATTGGTCCCAGATACTCTTTACCTCACTGTATATCTCATAGACTGGTTTCTCTCTCAAACTTACATGGAAAGACGACGACTTCAGTTGCTTGGCATAACCTGCATGCTAATTGCCTCGAAATACGAAGAAATTAATGCCCCACGAATTGAAGAATTCTGCTTCATCACAGACAACACATACACAAAAGAGGAGGTACGAAAAATGGAGACTGAAGTGTTGAAGTCCTCATCATATAAACTATTTGCTCCCACTACAAAAACTTTCCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCTTACGAGAGCCCGAGCTTCGAATTGGAGTACCTGGCAAATTACCTTGCTGAACTAACACTTATGAACTATGGTTTCTTAAATTTCCGTCCTTCTATGATTGCGGCATCTGCTGTATTTCTTGCTAGATGGACTTTAGATCGGTCAAGCCATCCATGGAATCCAACTCTTCAACACTATGCCTCTTATAAACCATCAGACTTGAAAGCCACAGTTCTTGCATTACGGGATCTACAGCTGAATAGCAATGACTGCCCTTTAACTGCCATCCGCACCAAGTATGAGCAAGAGAAGTTCAAATGTGTAGCGGCTTTGTCATCACCTGAATTGCTTGACACACTGTTCTGA 1338 0.4245 MKKENNVTRNVGDLPRRLTRAQAAAFLASGQLPPSKGVSQQKEKQLVKGNPKRAVSDNACLPRKKRAALQDVSNIFCETKGKGCLNAPKIQSKKGKLDKAGPSGVSKVLKEKSLPHSGLRPEDATCSVNNANNALLLLISQKKDVQMAAAEKSGVYELLNVLKGPDITDIDADFEDPQLCSFYATDIYKNLRIAELSRRPYPNYMETVQQDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSQTYMERRRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVRKMETEVLKSSSYKLFAPTTKTFLRRFLRAAQASYESPSFELEYLANYLAELTLMNYGFLNFRPSMIAASAVFLARWTLDRSSHPWNPTLQHYASYKPSDLKATVLALRDLQLNSNDCPLTAIRTKYEQEKFKCVAALSSPELLDTLF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00121 445 PANTHER CYCLINS 45 445 IPR039361 -
Aip08g00121 445 PANTHER CYCLIN-A2-4 45 445 - -
Aip08g00121 445 SUPERFAMILY Cyclin-like 175 307 IPR036915 -
Aip08g00121 445 CDD CYCLIN 216 305 IPR013763 -
Aip08g00121 445 Gene3D - 186 434 - -
Aip08g00121 445 Pfam Cyclin, C-terminal domain 315 437 IPR004367 -
Aip08g00121 445 SMART cyclin_7 319 407 IPR013763 -
Aip08g00121 445 SMART cyclin_7 222 306 IPR013763 -
Aip08g00121 445 MobiDBLite consensus disorder prediction 27 51 - -
Aip08g00121 445 Pfam Cyclin, N-terminal domain 186 307 IPR006671 -
Aip08g00121 445 Gene3D - 200 313 - -
Aip08g00121 445 SUPERFAMILY Cyclin-like 315 440 IPR036915 -
Aip08g00121 445 PIRSF Cyclin_A_B_D_E 3 444 IPR039361 -
Aip08g00121 445 SMART Cyclin_C_2 315 438 IPR004367 -
Aip08g00121 445 CDD CYCLIN 315 405 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00121 Aip-Chr8 740933 745693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00121 1 445 Core Cell Cycle Gene Families AT1G80370 52.463 2.47e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00121 K06627 - gmx:100793657 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00121 08 740933 745693 Aip08g00121 08 740933 745693 ECH