Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00120 ATGAGTGGAGCTTCGTTAACAGGCTTGCAAGACCACCTCAAACTGGCAAGAGAATACGCTCTCGAAGGACTCTACGACACTTCCATTATCTTCTTCGACGGCGCCGTTGCTCAGATCAACAAGCACCTAAACACTGTTGAGGATCCGTTAATCCGAGCGAAATGGATGAATGTGAAGAAAGCTCTGTCGGAGGAAACCGAAGTGGTGAAGCAGCTGGATGCGGAGAGAAGGGCATTTAAGGAAACTCCTGTTGGGAATGGGAGGAGGCGTCCTGCTTCACCTCCGATCTCCACCAAATCTAACTTCGTTTTTCAGCCGTTGGATGAGTATCCAACTTCTTCATCCAGCGGTCCAGGTGGTCCCTTGGACGATCCCGATGTGTGGAGACCGCCCAGTCGAGATGATTCTAGGTCTGGTAGCGGGAGAAGGCCCGTTGTTTCTACCCGCGGGCCTACTCGCAAGTCCCAGCAGGATGGAGCTTGGGCCCGTGGCGGCCCTACCAGGCCCGCTGCACGCGGTGCTAAGGCTGGTGGTGCTGCTGCTGCTGGTAGGGTTAACTCCGGAGCCCGGGGCGCAACCGCTGCCAAGAAAGGCACTGCTTCTGGAAAATCCAGCAAATCCGATTCAGTTAATGGTGATGGTGATGATGGGAAGACAAAGAAGGGGCAATATGAAGGTCCTGATCCGGACTTAGCTGAGATGCTCGAAAGGGACGTGTTGGAGACGTCTCCCGGAGTGAGATGGGACGATGTTGCAGGCCTCACTGAAGCCAAGAGGCTTCTTGAAGAAGCTGTTGTCCTTCCATTATGGATGCCTGAGTATTTCCAGGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCCGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAACGCATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGAGGTGGCCCCTGATGTCAATATAGATGACGTGGCTCGCCGTACAGAAGGCTATAGTGGAGATGATTTGACAAATGTATGTCGTGATGCTTCCCTGAATGGTATGAGGCGTAAGATAGCGGGAAAAACACGCGATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCCTGTTGCTATGTGTGATTTTGAGGAAGCTTTGAAGAAAGTCCAGCGAAGTGTTTCTCAGGCTGACATCGAACGTCATGAGAAGTGGTTTACTGAATTTGGATCAGCATAA 1602 0.4938 MSGASLTGLQDHLKLAREYALEGLYDTSIIFFDGAVAQINKHLNTVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKETPVGNGRRRPASPPISTKSNFVFQPLDEYPTSSSSGPGGPLDDPDVWRPPSRDDSRSGSGRRPVVSTRGPTRKSQQDGAWARGGPTRPAARGAKAGGAAAAGRVNSGARGATAAKKGTASGKSSKSDSVNGDGDDGKTKKGQYEGPDPDLAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALKKVQRSVSQADIERHEKWFTEFGSA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00120 533 MobiDBLite consensus disorder prediction 141 155 - -
Aip08g00120 533 ProSitePatterns AAA-protein family signature. 394 413 IPR003960 GO:0005524|GO:0016887
Aip08g00120 533 CDD AAA 279 422 - -
Aip08g00120 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 519 IPR027417 -
Aip08g00120 533 Gene3D - 243 524 IPR027417 -
Aip08g00120 533 MobiDBLite consensus disorder prediction 209 229 - -
Aip08g00120 533 Pfam AAA+ lid domain 444 485 IPR041569 -
Aip08g00120 533 Gene3D - 423 509 - -
Aip08g00120 533 PANTHER AAA DOMAIN-CONTAINING 5 533 - -
Aip08g00120 533 Gene3D - 3 80 - -
Aip08g00120 533 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 5 533 - -
Aip08g00120 533 SMART AAA_5 281 424 IPR003593 -
Aip08g00120 533 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 533 IPR028596 GO:0008017|GO:0008568|GO:0051013
Aip08g00120 533 MobiDBLite consensus disorder prediction 93 119 - -
Aip08g00120 533 Pfam ATPase family associated with various cellular activities (AAA) 285 422 IPR003959 GO:0005524|GO:0016887
Aip08g00120 533 MobiDBLite consensus disorder prediction 79 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00120 Aip-Chr8 729305 732419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00120 237 525 Calmodulin-binding Proteins AT3G56690 40.000 1.81e-50 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00120 K07767 - mnt:21402373 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00120 08 729305 732419 Aip08g00120 08 729305 732419 ECH