Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00106 ATGGAGAGCTTAAAATCACCTTTCAAGGGTGTTGTAAAAGACATTCGTGCAAGATCTTTTCACTATAAACAAGATTGGTCTTCTGCTACACACTCAGGATTCGGGCAATTATTGACCACTTTGCTTTTTATTTTGATTAACTTCAGGATCTTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCACTTCCTGTTATTGCATTTGGGGAGCAAATAAGTAGAGACACAGATGGAAGTTTGAGTACAGTGGAAACACTGGCTTCTACTGCCATATGTGGATTCATACACTCAGTATTTGGTGGTCAACCTCTGCTTATACTTGGTGTTGCTGAGCCAACCATCATCATGTATACATATTTATACAACTTTGCTAAAGATAGAGATGGTTTGGGACAAGAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTTTGGACTGCTCTCTTGTTATTTCTTCTTGCAATATTCAATGCTGGAAATATCATCAATAGATTTACAAGGATTGCTGGTGAGCTTTTTGGAATGCNNNNNNNNNNNGGCATCAAATGA 549 0.3807 MESLKSPFKGVVKDIRARSFHYKQDWSSATHSGFGQLLTTLLFILINFRILAPTTYIFFASALPVIAFGEQISRDTDGSLSTVETLASTAICGFIHSVFGGQPLLILGVAEPTIIMYTYLYNFAKDRDGLGQELFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMXXXXGIK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00106 182 Pfam HCO3- transporter family 7 174 IPR011531 GO:0006820|GO:0016021
Aip08g00106 182 PANTHER BORON TRANSPORTER 4-RELATED 1 176 - -
Aip08g00106 182 PANTHER ANION EXCHANGE PROTEIN 1 176 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00106 Aip-Chr8 591481 592266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00106 1 175 Antiporters AT1G74810 66.857 1.16e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00106 K24194 - gmx:100811184 273.478